RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CCDC117Q8IWD4 279 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 TAS1R2Q8TE23 839 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SEPT1Q8WYJ6 367 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 GRAMD1AQ96CP6 724 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 CYTH2Q99418 400 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 DDX56Q9NY93 547 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 TBX20Q9UMR3 447 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SKIP12755 728 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 HOXA10P31260 410 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 ARFIP2P53365 341 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 ITGA8P53708 1063 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SNRPFP62306 86 aaKnown RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 CDR2Q01850 454 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 ITKQ08881 620 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 MTM1Q13496 603 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 EMC2Q15006 297 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 TKFCQ3LXA3 575 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SLC20A1Q8WUM9 679 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 DNAJC19Q96DA6 116 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 SENP7Q9BQF6 1050 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 ROPN1BQ9BZX4 212 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 ROPN1Q9HAT0 212 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 NEU2Q9Y3R4 380 aa7.62□□□□□ -1.19
VCAN-202ENST00000342785 USP15Q9Y4E8 981 aaPredicted RBP7.62□□□□□ -1.19
VCAN-202ENST00000342785 CFAP73A6NFT4 308 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ZBTB7AO95365 584 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 PRKCBP05771 671 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 CAP2P40123 477 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 FNTAP49354 379 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 RCOR2Q8IZ40 523 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 C4orf32Q8N8J7 132 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ATP8B4Q8TF62 1192 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 AENQ8WTP8 325 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 SGSM3Q96HU1 749 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 NCAPGQ9BPX3 1015 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 HSD3B7Q9H2F3 369 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 TOPORSQ9NS56 1045 aaPredicted RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 OPHN1O60890 802 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 FAM153BP0C7A2 387 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 RALAP11233 206 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 AMPD2Q01433 879 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 TNFAIP2Q03169 654 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 FAM153CQ494X1 144 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 PRAMEF18Q5VWM3 479 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ATG4AQ8WYN0 398 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 NUF2Q9BZD4 464 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 HAUS2Q9NVX0 235 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 CPSF2Q9P2I0 782 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 FAM153AQ9UHL3 310 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ZFP69BQ9UJL9 534 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 IGSF9BQ9UPX0 1349 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 POLRMTO00411 1230 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 EML1O00423 815 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ICAM1P05362 532 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 MUTP22033 750 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 KCNA1Q09470 495 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 NFX1Q12986 1120 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 BZW1Q7L1Q6 419 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 CRLF3Q8IUI8 442 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ZFPM1Q8IX07 1006 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 MICALL2Q8IY33 904 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 CFAP69A5D8W1 941 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 SLITRK3O94933 977 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ZNF280CQ8ND82 737 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 MCUQ8NE86 351 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 BTBD6Q96KE9 485 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 A0A0A6YYK5 440 aaPredicted RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 GOLGA8RI6L899 631 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 GSTA1P08263 222 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 GSTA2P09210 222 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 RBP3P10745 1247 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 PDGFRAP16234 1089 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 MAGEA4P43358 317 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 NPTX2P47972 431 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 MYBPC2Q14324 1141 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 XRRA1Q6P2D8 792 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 SV2AQ7L0J3 742 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 GMCL1P1Q8NEA9 526 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 FOXP3Q9BZS1 431 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 CYP26B1Q9NR63 512 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 PCDHGC5Q9Y5F6 944 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 GAKO14976 1311 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 SPATA31A6Q5VVP1 1343 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 MYBL2P10244 700 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 RARGP13631 454 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 CYP11B1P15538 503 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 RRM1P23921 792 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 HNRNPH3P31942 346 aaKnown RBP7.61□□□□□ -1.19
VCAN-202ENST00000342785 AARSP49588 968 aaKnown RBP eCLIP7.61□□□□□ -1.19
VCAN-202ENST00000342785 TAP1Q03518 808 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 SPATA33Q96N06 139 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ECT2Q9H8V3 914 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 TMBIM4Q9HC24 238 aa7.61□□□□□ -1.19
VCAN-202ENST00000342785 ATRNO75882 1429 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 NFIBO00712 420 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 ZBTB39O15060 712 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 EIF3EP60228 445 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms