RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 MCEEQ96PE7 176 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SLC9A2Q9UBY0 812 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SCOCQ9UIL1 159 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 AFF2P51816 1311 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 CAMTA1Q9Y6Y1 1673 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SLITRK3O94933 977 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SP8Q8IXZ3 490 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SMC1BQ8NDV3 1235 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 TRIM33Q9UPN9 1127 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 CYP11B1P15538 503 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 NQO1P15559 274 aaKnown RBP13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 PSMC5P62195 406 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 KCNJ2P63252 427 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 PPP4R1Q8TF05 950 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 HEXIM2Q96MH2 286 aaKnown RBP13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 CHMP2BQ9UQN3 213 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SCINQ9Y6U3 715 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 RIPK2O43353 540 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 GRAP2O75791 330 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 FSBPO95073 299 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 ASNSP08243 561 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 WEE2P0C1S8 567 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 HIF1AQ16665 826 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 LVRNQ6Q4G3 990 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 SHCBP1LQ9BZQ2 653 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 POLR3FQ9H1D9 316 aaPredicted RBP13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 UVRAGQ9P2Y5 699 aa13.17□□□□□ -0.3
SNRNP48-201ENST00000342415 LPXNO60711 386 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ATP6V1G2O95670 118 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 PAX7P23759 505 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ORC1Q13415 861 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 C3orf62Q6ZUJ4 267 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 RBM41Q96IZ5 413 aaKnown RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 MKNK1Q9BUB5 465 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 TMEM39BQ9GZU3 492 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 KRT4P19013 534 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ALCAMQ13740 583 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 STAT4Q14765 748 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 GRAMD1BQ3KR37 738 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ATXN7L3BQ96GX2 97 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 PRMT6Q96LA8 375 aaPredicted RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 FAM81BQ96LP2 452 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ZNF277Q9NRM2 450 aaPredicted RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 TRPA1O75762 1119 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ZBED1O96006 694 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 CYP4A22Q5TCH4 519 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
SNRNP48-201ENST00000342415 MAP3K7O43318 606 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 GGPS1O95749 300 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 FGRP09769 529 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 SREBF1P36956 1147 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 COL23A1Q86Y22 540 aaPredicted RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 POLR3CQ9BUI4 534 aaPredicted RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 LTN1O94822 1766 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 DNM1LO00429 736 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 EIF3DO15371 548 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 ENO1P06733 434 aaKnown RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 PSAPP07602 524 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 FECHP22830 423 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 BAATQ14032 418 aaPredicted RBP13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 PPP1R36Q96LQ0 422 aa13.15□□□□□ -0.3
SNRNP48-201ENST00000342415 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms