RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 IGSF22Q8N9C0 903 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 PPP1R10Q96QC0 940 aaKnown RBP14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 KIFC3Q9BVG8 833 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 TIPINQ9BVW5 301 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 ARHGEF3Q9NR81 526 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 RIF1Q5UIP0 2472 aaKnown RBP14.34□□□□□ -0.11
NECTIN1-203ENST00000341398 FAM186AA6NE01 2351 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 MYH15Q9Y2K3 1946 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 SMIM28A0A1B0GU29 152 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 GRM5P41594 1212 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 ECM1Q16610 540 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 UPP1Q16831 310 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 ZNF568Q3ZCX4 644 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 FGF13Q92913 245 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 ACAP3Q96P50 834 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 ACO2Q99798 780 aaKnown RBP14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 MTRRQ9UBK8 725 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 KCNH3Q9ULD8 1083 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 CDY1Q9Y6F8 540 aa14.33□□□□□ -0.12
NECTIN1-203ENST00000341398 H7C4K7 107 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 PRPHP41219 470 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 NPTX2P47972 431 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 SMTNP53814 917 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 PFKPQ01813 784 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 STRN3Q13033 797 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 PABPC1LQ4VXU2 614 aaKnown RBP14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 ZC3H14Q6PJT7 736 aaKnown RBP14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 KCTD17Q8N5Z5 321 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 KCNG4Q8TDN1 519 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 CXCL16Q9H2A7 254 aa14.32□□□□□ -0.12
NECTIN1-203ENST00000341398 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 E9PMD0 336 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 ADAM12O43184 909 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 HIP1RO75146 1068 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 LRG1P02750 347 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 EDN1P05305 212 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 MCF2P10911 925 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 PTPN2P17706 415 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 TKTP29401 623 aaKnown RBP14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 RPL9P32969 192 aaKnown RBP14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 STARD6P59095 220 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 OSTNP61366 133 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 GPC5P78333 572 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 NTHL1P78549 312 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 FOXK2Q01167 660 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 NBR1Q14596 966 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 RINT1Q6NUQ1 792 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 PARM1Q6UWI2 310 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 ALKAL1Q6UXT8 129 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 ADSSL1Q8N142 457 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 ZNF461Q8TAF7 563 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 FGF14Q92915 247 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 MRPS23Q9Y3D9 190 aaKnown RBP14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 PCDHB6Q9Y5E3 794 aa14.31□□□□□ -0.12
NECTIN1-203ENST00000341398 MYO15AQ9UKN7 3530 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 PRRG1O14668 218 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 SYN3O14994 580 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 DCNP07585 359 aaKnown RBP14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 PRKCQQ04759 706 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 RILPL1Q5EBL4 403 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 XKR4Q5GH76 650 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 MCTP1Q6DN14 999 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 MPZL3Q6UWV2 235 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 C1orf210Q8IVY1 113 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 CDK5RAP3Q96JB5 506 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 NTPCRQ9BSD7 190 aaKnown RBP14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 TARS2Q9BW92 718 aaKnown RBP14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 CDT1Q9H211 546 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 GOLGA2P5Q9HBQ8 144 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 PTPRHQ9HD43 1115 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 GDE1Q9NZC3 331 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 ARHGAP28Q9P2N2 729 aa14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 DNMT3BQ9UBC3 853 aaKnown RBP14.3□□□□□ -0.12
NECTIN1-203ENST00000341398 PODXLO00592 558 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 ZNF197O14709 1029 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 KCNE1P15382 129 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 BRCC3P46736 316 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 ZRSR1Q15695 479 aaKnown RBP14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 SLC44A4Q53GD3 710 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 C1orf186Q6ZWK4 172 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 ELMOD1Q8N336 334 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 CEP120Q8N960 986 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 PJA1Q8NG27 643 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 ITFG1Q8TB96 612 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 BORCS6Q96GS4 357 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 RPP25Q9BUL9 199 aaKnown RBP14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 BCO2Q9BYV7 579 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 NOTCH4Q99466 2003 aa14.29□□□□□ -0.12
NECTIN1-203ENST00000341398 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms