RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 RGS20O76081 388 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 MAPK4P31152 587 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 KCNJ1P48048 391 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 ZNF280AP59817 542 aaPredicted RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 DRP2Q13474 957 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 C6orf118Q5T5N4 469 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 MCOLN2Q8IZK6 566 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CNPY4Q8N129 248 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 BICD1Q96G01 975 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 FAM213AQ9BRX8 229 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 ATP6V0A4Q9HBG4 840 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 JPH1Q9HDC5 661 aaPredicted RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 NFASCO94856 1347 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 MROH7Q68CQ1 1323 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 MYPNQ86TC9 1320 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 RGS16O15492 202 aaPredicted RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 AGTP01019 485 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 MYBL1P10243 752 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 FGFR4P22455 802 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 PRKCEQ02156 737 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CALCOCO2Q13137 446 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 SGO2Q562F6 1265 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 UBAP2Q5T6F2 1119 aaKnown RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 SWSAP1Q6NVH7 229 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CCDC60Q8IWA6 550 aaPredicted RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 REPS2Q8NFH8 660 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 NSUN6Q8TEA1 469 aaKnown RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 TRIM11Q96F44 468 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 IFT74Q96LB3 600 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 XPO6Q96QU8 1125 aaKnown RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 KIAA1586Q9HCI6 787 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CYP26B1Q9NR63 512 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 SLC9A2Q9UBY0 812 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 SEPT9Q9UHD8 586 aaPredicted RBP15.56■□□□□ 0.08
TDP2-201ENST00000341060 PCDHB2Q9Y5E7 798 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CAPN7Q9Y6W3 813 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CHN1P15882 459 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 SCP2P22307 547 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 OAZ1P54368 228 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 BACE1P56817 501 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 CENPCQ03188 943 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 PPP1R7Q15435 360 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 ZNF568Q3ZCX4 644 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 TNFAIP8L3Q5GJ75 292 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
TDP2-201ENST00000341060 MDM1Q8TC05 714 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 ZNF516Q92618 1163 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 SEC16BQ96JE7 1060 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 ADAM7Q9H2U9 754 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 AZI2Q9H6S1 392 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 WHRNQ9P202 907 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 TLDC2A0PJX2 215 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 TP73O15350 636 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 EXTL3O43909 919 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 SLC1A1P43005 524 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 KRT17Q04695 432 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 PLCB4Q15147 1175 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 ZACNQ401N2 412 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 RNF187Q5TA31 235 aaPredicted RBP15.55■□□□□ 0.08
TDP2-201ENST00000341060 GKAP1Q5VSY0 366 aaPredicted RBP15.55■□□□□ 0.08
TDP2-201ENST00000341060 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 CACNA2D3Q8IZS8 1091 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 MAIP1Q8WWC4 291 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 CHMP6Q96FZ7 201 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 CDHR1Q96JP9 859 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 CABS1Q96KC9 395 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 SYT17Q9BSW7 474 aa15.55■□□□□ 0.08
TDP2-201ENST00000341060 STMN4Q9H169 189 aaPredicted RBP15.55■□□□□ 0.08
TDP2-201ENST00000341060 POLR3FQ9H1D9 316 aaPredicted RBP15.55■□□□□ 0.08
TDP2-201ENST00000341060 CALCAP01258 141 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 RRM1P23921 792 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 MAN1A1P33908 653 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 BPIFB4P59827 614 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 ACTR2P61160 394 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 PSMD6Q15008 389 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 FBXW10Q5XX13 1052 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 TRMT10CQ7L0Y3 403 aaKnown RBP15.54■□□□□ 0.08
TDP2-201ENST00000341060 EPS8L3Q8TE67 593 aaKnown RBP15.54■□□□□ 0.08
TDP2-201ENST00000341060 ATXN2LQ8WWM7 1075 aaKnown RBP15.54■□□□□ 0.08
TDP2-201ENST00000341060 KCNG1Q9UIX4 513 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
TDP2-201ENST00000341060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
TDP2-201ENST00000341060 TELO2Q9Y4R8 837 aa15.54■□□□□ 0.08
TDP2-201ENST00000341060 SMIM23A6NLE4 172 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 RASGRF2O14827 1237 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 STAM2O75886 525 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 CYP1A1P04798 512 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 DRD4P21917 467 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 LIG4P49917 911 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 ACTN3Q08043 901 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 WDR44Q5JSH3 913 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 ABHD15Q6UXT9 468 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 CCDC121Q6ZUS5 278 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 CPLX4Q7Z7G2 160 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 C1orf54Q8WWF1 131 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 CPA5Q8WXQ8 436 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 KCNN1Q92952 543 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 FAM84AQ96KN4 292 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms