RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 GARTP22102 1010 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 CASP4P49662 377 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 CLCNKBP51801 687 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 TFAMQ00059 246 aaKnown RBP14.35□□□□□ -0.11
TUBD1-202ENST00000340993 PLPP4Q5VZY2 271 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 SPATA20Q8TB22 786 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
TUBD1-202ENST00000340993 GAS2L1Q99501 681 aaPredicted RBP14.35□□□□□ -0.11
TUBD1-202ENST00000340993 POP1Q99575 1024 aaKnown RBP14.35□□□□□ -0.11
TUBD1-202ENST00000340993 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 C5orf42Q9H799 3197 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 C2CD2LO14523 706 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 CALUO43852 315 aaPredicted RBP14.34□□□□□ -0.11
TUBD1-202ENST00000340993 LPXNO60711 386 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 CLSTN1O94985 981 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 KIF4AO95239 1232 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 IRS1P35568 1242 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 MORC3Q14149 939 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 SNRNP35Q16560 246 aaKnown RBP14.34□□□□□ -0.11
TUBD1-202ENST00000340993 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 ALKAL1Q6UXT8 129 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 EFCAB13Q8IY85 973 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 MICAL1Q8TDZ2 1067 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 KCNN1Q92952 543 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TMEM169Q96HH4 297 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
TUBD1-202ENST00000340993 SPG21Q9NZD8 308 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 CNTN3Q9P232 1028 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 UNC80Q8N2C7 3258 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 BRWD1Q9NSI6 2320 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 PPEF2O14830 753 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 ALDH2P05091 517 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 NR2F2P24468 414 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 DSC1Q08554 894 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TUSC3Q13454 348 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TMEM132DQ14C87 1099 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 NAB2Q15742 525 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TAS1R1Q7RTX1 841 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 GUF1Q8N442 669 aaKnown RBP14.34□□□□□ -0.11
TUBD1-202ENST00000340993 XXYLT1Q8NBI6 393 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 NELFBQ8WX92 580 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 IGSF21Q96ID5 467 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.11
TUBD1-202ENST00000340993 ENTPD7Q9NQZ7 604 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 MARCH5Q9NX47 278 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TMEM63CQ9P1W3 806 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 RWDD3Q9Y3V2 267 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 PTPRJQ12913 1337 aa14.34□□□□□ -0.11
TUBD1-202ENST00000340993 TMEM265A0A087WTH1 108 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 ZNF233A6NK53 670 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 H3BNC9 293 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 B3GAT3O94766 335 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 MBD3O95983 291 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 STIM1Q13586 685 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 ANKRD40Q6AI12 368 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 RBM23Q86U06 439 aaKnown RBP14.33□□□□□ -0.12
TUBD1-202ENST00000340993 CEP57Q86XR8 500 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 GLYCTKQ8IVS8 523 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 BRSK2Q8IWQ3 736 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 ADSSL1Q8N142 457 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 C3orf58Q8NDZ4 430 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 SPPL3Q8TCT6 385 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 ELMO3Q96BJ8 720 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 VN1R3Q9BXE9 311 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 MTMR12Q9C0I1 747 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 VWA8A3KMH1 1905 aa14.33□□□□□ -0.12
TUBD1-202ENST00000340993 PODXLO00592 558 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 PDXKO00764 312 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 TADA2AO75478 443 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 KIF20AO95235 890 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 BRCC3P46736 316 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 CDR1P51861 262 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 ERVFC1P60507 584 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 HSP90AA2PQ14568 343 aaPredicted RBP14.32□□□□□ -0.12
TUBD1-202ENST00000340993 DPCR1Q3MIW9 517 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 FAM43BQ6ZT52 329 aaPredicted RBP14.32□□□□□ -0.12
TUBD1-202ENST00000340993 CREBRFQ8IUR6 639 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 ELOA2Q8IYF1 753 aaPredicted RBP14.32□□□□□ -0.12
TUBD1-202ENST00000340993 VPS52Q8N1B4 723 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 SAMD11Q96NU1 681 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 TCF25Q9BQ70 676 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 IGFLR1Q9H665 355 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 C5orf67F2Z3F1 127 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 PSMA7O14818 248 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 INPPL1O15357 1258 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 LDHAP00338 332 aaKnown RBP14.32□□□□□ -0.12
TUBD1-202ENST00000340993 KRT19P08727 400 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 KCNE1P15382 129 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 GTF2F1P35269 517 aaKnown RBP eCLIP14.32□□□□□ -0.12
TUBD1-202ENST00000340993 KRT17Q04695 432 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 ADAM9Q13443 819 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 KYAT1Q16773 422 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 TMC7Q7Z402 723 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms