RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SV2AQ7L0J3 742 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 SPATA21Q7Z572 469 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 AGAP11Q8TF27 550 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 CENPTQ96BT3 561 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 SNF8Q96H20 258 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 CEP170P1Q96L14 293 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 C10orf88Q9H8K7 445 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 KIF9Q9HAQ2 790 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 SAYSD1Q9NPB0 183 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ZNF148Q9UQR1 794 aa15.35■□□□□ 0.05
CPSF7-201ENST00000340437 ADSSP30520 456 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 DRG2P55039 364 aaKnown RBP15.34■□□□□ 0.05
CPSF7-201ENST00000340437 GSCP56915 257 aaPredicted RBP15.34■□□□□ 0.05
CPSF7-201ENST00000340437 CDR2Q01850 454 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 SPP2Q13103 211 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 DNAJC3Q13217 504 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 SYCP2LQ5T4T6 812 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 IZUMO3Q5VZ72 239 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 AAASQ9NRG9 546 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 KLHL14Q9P2G3 628 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 GTF3C4Q9UKN8 822 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 NAALADL1Q9UQQ1 740 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 GJA3Q9Y6H8 435 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 PIK3CDO00329 1044 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 DNAJC8O75937 253 aaPredicted RBP15.34■□□□□ 0.05
CPSF7-201ENST00000340437 MMP14P50281 582 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 DYNLT1P63172 113 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 CLUL1Q15846 466 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 PRAMEF18Q5VWM3 479 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 OGFOD1Q8N543 542 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 RMDN2Q96LZ7 410 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 PITPNM3Q9BZ71 974 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 CNOT7Q9UIV1 285 aaKnown RBP15.34■□□□□ 0.05
CPSF7-201ENST00000340437 MCM8Q9UJA3 840 aa15.34■□□□□ 0.05
CPSF7-201ENST00000340437 ANP32DO95626 131 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.05
CPSF7-201ENST00000340437 DMP1Q13316 513 aaPredicted RBP15.33■□□□□ 0.05
CPSF7-201ENST00000340437 ACAD10Q6JQN1 1059 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 VSTM1Q6UX27 236 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 FNBP1Q96RU3 617 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 ETNK1Q9HBU6 452 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.05
CPSF7-201ENST00000340437 NINJ2Q9NZG7 142 aa15.33■□□□□ 0.05
CPSF7-201ENST00000340437 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.33■□□□□ 0.05
CPSF7-201ENST00000340437 TTC4O95801 387 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 KRT16P08779 473 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 NQO1P15559 274 aaKnown RBP15.33■□□□□ 0.04
CPSF7-201ENST00000340437 P3H1Q32P28 736 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 TKFCQ3LXA3 575 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 TRIM68Q6AZZ1 485 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 PARD3BQ8TEW8 1205 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 FAM167BQ9BTA0 163 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.33■□□□□ 0.04
CPSF7-201ENST00000340437 H0YIN7 160 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 NPTX2P47972 431 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 SIX1Q15475 284 aaPredicted RBP15.33■□□□□ 0.04
CPSF7-201ENST00000340437 TMEM270Q6UE05 265 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 C1orf112Q9NSG2 853 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 TBX20Q9UMR3 447 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
CPSF7-201ENST00000340437 H0Y3Z8 333 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 BANF1O75531 89 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 UPP2O95045 317 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 NCALDP61601 193 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 BTNL9Q6UXG8 535 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 KRT27Q7Z3Y8 459 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 FITM2Q8N6M3 262 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 RSRC1Q96IZ7 334 aaKnown RBP15.32■□□□□ 0.04
CPSF7-201ENST00000340437 TMEM237Q96Q45 408 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 CCDC77Q9BR77 488 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 SLC24A3Q9HC58 644 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 PCDHB4Q9Y5E5 795 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 BTAF1O14981 1849 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 EXOC1LA0A1B0GW35 172 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 MGRN1O60291 552 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 GHRP10912 638 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 GZMAP12544 262 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 ITIH4Q14624 930 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 TRMT10CQ7L0Y3 403 aaKnown RBP15.32■□□□□ 0.04
CPSF7-201ENST00000340437 ANKMY2Q8IV38 441 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 SHC3Q92529 594 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 KLF6Q99612 283 aaPredicted RBP15.32■□□□□ 0.04
CPSF7-201ENST00000340437 SLCO1B3Q9NPD5 702 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 TELO2Q9Y4R8 837 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 NEBLO76041 1014 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 NEFHP12036 1026 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 WDR44Q5JSH3 913 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 CD101Q93033 1021 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 RBM15Q96T37 977 aaKnown RBP eCLIP15.32■□□□□ 0.043e-6■□□□□ 8.7
CPSF7-201ENST00000340437 NHSQ6T4R5 1651 aa15.32■□□□□ 0.04
CPSF7-201ENST00000340437 GOLGA8RI6L899 631 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 GGPS1O95749 300 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 RFX1P22670 979 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 GBP1P32455 592 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms