RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ACAP3Q96P50 834 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 RTP3Q9BQQ7 232 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 CLSTN3Q9BQT9 956 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 MRPL4Q9BYD3 311 aaKnown RBP11.7□□□□□ -0.54
CAPN3-202ENST00000337571 TMEM134Q9H6X4 195 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 FAM86C1Q9NVL1 165 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 EPS15L1Q9UBC2 864 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 WNT16Q9UBV4 365 aa11.7□□□□□ -0.54
CAPN3-202ENST00000337571 PP2D1A8MPX8 630 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 HIP1RO75146 1068 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 C8AP07357 584 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 CFHP08603 1231 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 CDC25AP30304 524 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 OR1D2P34982 312 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 GRM5P41594 1212 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 OSTNP61366 133 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 ZNF568Q3ZCX4 644 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 AXDND1Q5T1B0 1012 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-202ENST00000337571 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 GRASPQ7Z6J2 395 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-202ENST00000337571 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 RSAD2Q8WXG1 361 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 MYADMQ96S97 322 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 ACO2Q99798 780 aaKnown RBP11.69□□□□□ -0.54
CAPN3-202ENST00000337571 CXCL16Q9H2A7 254 aa11.69□□□□□ -0.54
CAPN3-202ENST00000337571 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
CAPN3-202ENST00000337571 SMIM28A0A1B0GU29 152 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 SFI1A8K8P3 1242 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 TMEM189-UBE2V1I3L0A0 370 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 NARSO43776 548 aaKnown RBP11.68□□□□□ -0.54
CAPN3-202ENST00000337571 GFRA3O60609 400 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 N4BP1O75113 896 aaKnown RBP11.68□□□□□ -0.54
CAPN3-202ENST00000337571 PAPLNO95428 1278 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 EDN1P05305 212 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 SRFP11831 508 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 AOC1P19801 751 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 FGFR3P22607 806 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 ELF1P32519 619 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPN3-202ENST00000337571 RAB33AQ14088 237 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 NAB2Q15742 525 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 UPP1Q16831 310 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 RTL10Q7L3V2 364 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 PPP1R10Q96QC0 940 aaKnown RBP11.68□□□□□ -0.54
CAPN3-202ENST00000337571 TARS2Q9BW92 718 aaKnown RBP11.68□□□□□ -0.54
CAPN3-202ENST00000337571 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
CAPN3-202ENST00000337571 FBXW11Q9UKB1 542 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
CAPN3-202ENST00000337571 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 SLC16A4O15374 487 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 CCL16O15467 120 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 MCF2P10911 925 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 HARSP12081 509 aaKnown RBP11.67□□□□□ -0.54
CAPN3-202ENST00000337571 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 GJB2P29033 226 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 HOXA9P31269 272 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 RPL9P32969 192 aaKnown RBP11.67□□□□□ -0.54
CAPN3-202ENST00000337571 MCM2P49736 904 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 RAD51AP2Q09MP3 1159 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 IL17AQ16552 155 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 MPZL3Q6UWV2 235 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 C1orf186Q6ZWK4 172 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 MTSS1LQ765P7 747 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 SYT2Q8N9I0 419 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-202ENST00000337571 SLC7A14Q8TBB6 771 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 PLIN2Q99541 437 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
CAPN3-202ENST00000337571 RUSC1Q9BVN2 902 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 CDT1Q9H211 546 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 KCND2Q9NZV8 630 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 CA14Q9ULX7 337 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 SMC3Q9UQE7 1217 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-202ENST00000337571 BACE2Q9Y5Z0 518 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 MYH11P35749 1972 aa11.67□□□□□ -0.54
CAPN3-202ENST00000337571 ANHXE9PGG2 379 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 H0YCG3 227 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 H7C4K7 107 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 I3L4J1 428 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 PRRG1O14668 218 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 CLDN3O15551 220 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 PI15O43692 258 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 PLS3P13797 630 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 NPR3P17342 541 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 TKTP29401 623 aaKnown RBP11.66□□□□□ -0.54
CAPN3-202ENST00000337571 MARCKSP29966 332 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-202ENST00000337571 UBA7P41226 1012 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-202ENST00000337571 XKR4Q5GH76 650 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
CAPN3-202ENST00000337571 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
CAPN3-202ENST00000337571 DAW1Q8N136 415 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms