RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 UBAP2Q5T6F2 1119 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 SCYL3Q8IZE3 742 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 WNK4Q96J92 1243 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 RILPQ96NA2 401 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 IWS1Q96ST2 819 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 HSD17B14Q9BPX1 270 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 TUFT1Q9NNX1 390 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 RTN2O75298 545 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 SKAP2O75563 359 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 STAM2O75886 525 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 NEBLO76041 1014 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 MAN1A1P33908 653 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 PCK1P35558 622 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 RAP1GAPP47736 663 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 CDH8P55286 799 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 PDIA2Q13087 525 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 SNCBQ16143 134 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 SLC15A2Q16348 729 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 CRY2Q49AN0 593 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 OR6B2Q6IFH4 312 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 C1orf228Q6PIY5 440 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 TMC3Q7Z5M5 1100 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 FAM160B2Q86V87 743 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 ERICH1Q86X53 443 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 FAM151AQ8WW52 585 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 SEMA4DQ92854 862 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 CFAP36Q96G28 342 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 TGS1Q96RS0 853 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 RBM15Q96T37 977 aaKnown RBP eCLIP8.75□□□□□ -1.012e-6■■■■□ 23.7
HPS4-201ENST00000336873 TMEM121Q9BTD3 319 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 TRIM6Q9C030 488 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 C12orf65Q9H3J6 166 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 KLC4Q9NSK0 619 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 HERC5Q9UII4 1024 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 CNOT7Q9UIV1 285 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 FEM1BQ9UK73 627 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 ODF2LQ9ULJ1 636 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 TBX20Q9UMR3 447 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 TMX2Q9Y320 296 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 SLIT2O94813 1529 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 SNED1Q8TER0 1413 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 PSMA2P25787 234 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 ITGB3BPQ13352 177 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 TNFAIP1Q13829 316 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 EML3Q32P44 896 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 KCTD6Q8NC69 237 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 C1orf131Q8NDD1 294 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 UBA3Q8TBC4 463 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 SYTL5Q8TDW5 730 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 N4BP2L2Q92802 583 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 XPO6Q96QU8 1125 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 PCDHB18PQ96TA0 734 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 CDC42EP4Q9H3Q1 356 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 TMBIM4Q9HC24 238 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 JPH1Q9HDC5 661 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 SUCLA2Q9P2R7 463 aaPredicted RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
HPS4-201ENST00000336873 SUFUQ9UMX1 484 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 INPP5FQ9Y2H2 1132 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 PSMD10O75832 226 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 UPP2O95045 317 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 FAM107AO95990 144 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PRLRP16471 622 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 GTF2H1P32780 548 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 GJC2Q5T442 439 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 IL31Q6EBC2 164 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 SLC13A5Q86YT5 568 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 IQCKQ8N0W5 287 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PPP1R36Q96LQ0 422 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 POLR3CQ9BUI4 534 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 SLITRK6Q9H5Y7 841 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 ETNK1Q9HBU6 452 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PHLPP1O60346 1717 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 MYH14Q7Z406 1995 aaKnown RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 TBX3O15119 743 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 RGL2O15211 777 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 SNHG28P0DPA3 235 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 NRLP54845 237 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 GPD1LQ8N335 351 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 LRRC8CQ8TDW0 803 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PYROXD1Q8WU10 500 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 ZSWIM1Q9BR11 485 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 MTMR12Q9C0I1 747 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 CXorf56Q9H5V9 222 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 KIF9Q9HAQ2 790 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 SLC9A2Q9UBY0 812 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 A6NNZ2 444 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PJA2O43164 708 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 RNF8O76064 485 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 SUN1O94901 812 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 GH1P01241 217 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PSAPP07602 524 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 VCAM1P19320 739 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 CCND2P30279 289 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 CHRNA3P32297 505 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms