RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 VNN1O95497 513 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 FAM153BP0C7A2 387 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 YBX3P16989 372 aaKnown RBP eCLIP17.88■□□□□ 0.451e-7■■■■□ 23.4
TMEM39B-201ENST00000336294 COMTP21964 271 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 MARK3P27448 753 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 DRP2Q13474 957 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 FAM153CQ494X1 144 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 ZBTB41Q5SVQ8 909 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 CDCA2Q69YH5 1023 aaPredicted RBP17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 GPAT2Q6NUI2 795 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 ZBTB8OSQ8IWT0 167 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 RIN2Q8WYP3 895 aaPredicted RBP17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 CCDC113Q9H0I3 377 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 FAM153AQ9UHL3 310 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 CNTNAP2Q9UHC6 1331 aa17.88■□□□□ 0.45
TMEM39B-201ENST00000336294 HSPA6P17066 643 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 SLC26A2P50443 739 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 AP3M2P53677 418 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 PTENP60484 403 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 CUL2Q13617 745 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 HLTFQ14527 1009 aaKnown RBP eCLIP17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 HSDL1Q3SXM5 330 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 WDR78Q5VTH9 848 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 SHCBP1Q8NEM2 672 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 TRIM11Q96F44 468 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 SPATA33Q96N06 139 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 SH3GL2Q99962 352 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 JPH2Q9BR39 696 aaPredicted RBP17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 C2orf40Q9H1Z8 148 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 CNOT8Q9UFF9 292 aaKnown RBP17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
TMEM39B-201ENST00000336294 IGKV6-21A0A0C4DH24 114 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 GOLGA8KD6RF30 607 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 TULP2O00295 520 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 TOM1L1O75674 476 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 HARSP12081 509 aaKnown RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 TBXAS1P24557 533 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 GUCY2FP51841 1108 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 LAMTOR4Q0VGL1 99 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 GRM1Q13255 1194 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 ZNF211Q13398 564 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 PLCB4Q15147 1175 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 TRIM50Q86XT4 487 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 BRSK2Q8IWQ3 736 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 FBXO16Q8IX29 292 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 CHORDC1Q9UHD1 332 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 SPOPO43791 374 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 MSCO60682 206 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 MYBL1P10243 752 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 UNGP13051 313 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 CTNNA2P26232 953 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 SNAPC2Q13487 334 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 TRADDQ15628 312 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 CFAP58Q5T655 872 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 SEL1L2Q5TEA6 688 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 NAA35Q5VZE5 725 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 SPOPLQ6IQ16 392 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 CCDC62Q6P9F0 684 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 KRT35Q92764 455 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 CD101Q93033 1021 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 SMARCAD1Q9H4L7 1026 aa17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 UTP11Q9Y3A2 253 aaKnown RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 ZNFX1Q9P2E3 1918 aaKnown RBP17.86■□□□□ 0.45
TMEM39B-201ENST00000336294 ASB14A6NK59 587 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 ZBTB42B2RXF5 422 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 TTI1O43156 1089 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 PRKCBP05771 671 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 CLTAP09496 248 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 SRGAP2CP0DJJ0 459 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 TXNP10599 105 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 ACO1P21399 889 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 CTNNA1P35221 906 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 PEX5P50542 639 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 POU5F1Q01860 360 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 PPFIA1Q13136 1202 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 TTLL4Q14679 1199 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 MAPK6Q16659 721 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 WDR49Q8IV35 697 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 RNF149Q8NC42 400 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 ACO2Q99798 780 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 TCHPQ9BT92 498 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 RAB17Q9H0T7 212 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 APOBEC3GQ9HC16 384 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 AVENQ9NQS1 362 aaPredicted RBP17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 FAM114A2Q9NRY5 505 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 PNMA3Q9UL41 463 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
TMEM39B-201ENST00000336294 ECHS1P30084 290 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 NOP14P78316 857 aaKnown RBP17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 NCOA4Q13772 614 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 TFDP1Q14186 410 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 TRIM72Q6ZMU5 477 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 ZBTB33Q86T24 672 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 MCOLN2Q8IZK6 566 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 LRRC71Q8N4P6 559 aa17.84■□□□□ 0.45
TMEM39B-201ENST00000336294 OR5B17Q8NGF7 314 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms