RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 LRRC57Q8N9N7 239 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 GRAPLQ8TC17 118 aaPredicted RBP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 NACA2Q9H009 215 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 R3HDM2Q9Y2K5 976 aaKnown RBP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 RABGAP1Q9Y3P9 1069 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 ITGB4P16144 1822 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 E2F6O75461 281 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 CFBP00751 764 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 ITGA2BP08514 1039 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 MARK3P27448 753 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 RBM26Q5T8P6 1007 aaKnown RBP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 LNX1Q8TBB1 728 aaPredicted RBP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 LENG1Q96BZ8 264 aaPredicted RBP12.6□□□□□ -0.39
LIMK2-202ENST00000333611 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 DCLRE1BQ9H816 532 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 TMCO1Q9UM00 188 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 DAGLAQ9Y4D2 1042 aa12.6□□□□□ -0.39
LIMK2-202ENST00000333611 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 PPP4CP60510 307 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 MTMR2Q13614 643 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 AGGF1Q8N302 714 aaeCLIP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 KRT35Q92764 455 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 UTP4Q969X6 686 aaKnown RBP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 FAM118BQ9BPY3 351 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 NPHS2Q9NP85 383 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 SUCLA2Q9P2R7 463 aaPredicted RBP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 ASIC3Q9UHC3 531 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 MAPK13O15264 365 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 LYNP07948 512 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 VAV1P15498 845 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 KRT15P19012 456 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 TAF1BQ53T94 588 aaPredicted RBP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 JAMLQ86YT9 394 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
LIMK2-202ENST00000333611 SLC20A1Q8WUM9 679 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 CENPOQ9BU64 300 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 PASKQ96RG2 1323 aa12.59□□□□□ -0.39
LIMK2-202ENST00000333611 PSMD7P51665 324 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 RHBDL3P58872 404 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 LIN52Q52LA3 116 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 COBLL1Q53SF7 1204 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 SLFN13Q68D06 897 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 SATL1Q86VE3 508 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 ALG3Q92685 438 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.39
LIMK2-202ENST00000333611 SLITRK6Q9H5Y7 841 aa12.58□□□□□ -0.39
LIMK2-202ENST00000333611 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.39
LIMK2-202ENST00000333611 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 MYH14Q7Z406 1995 aaKnown RBP12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ARHGAP42A6NI28 874 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 TOM1O60784 492 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 HLA-DOAP06340 250 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 CETN2P41208 172 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 NCCRP1Q6ZVX7 275 aaPredicted RBP12.58□□□□□ -0.4
LIMK2-202ENST00000333611 CCDC80Q76M96 950 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 RASSF3Q86WH2 238 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 WDR75Q8IWA0 830 aaKnown RBP12.58□□□□□ -0.4
LIMK2-202ENST00000333611 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 NME8Q8N427 588 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ZNF333Q96JL9 665 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
LIMK2-202ENST00000333611 FRMD4BQ9Y2L6 1034 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 A0A1B0GUL6 1792 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 PAEPP09466 180 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ALADP13716 330 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ZFXP17010 805 aaPredicted RBP12.58□□□□□ -0.4
LIMK2-202ENST00000333611 NFIAQ12857 509 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 EPHA7Q15375 998 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ODR4Q5SWX8 454 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 FRMD5Q7Z6J6 570 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 FAM178BQ8IXR5 827 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ERP44Q9BS26 406 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 NDEL1Q9GZM8 345 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 ZNF510Q9Y2H8 683 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.4
LIMK2-202ENST00000333611 LRP5O75197 1615 aa12.57□□□□□ -0.4
LIMK2-202ENST00000333611 XPOTO43592 962 aaKnown RBP12.57□□□□□ -0.4
LIMK2-202ENST00000333611 TM4SF1P30408 202 aa12.57□□□□□ -0.4
LIMK2-202ENST00000333611 SOX5P35711 763 aa12.57□□□□□ -0.4
LIMK2-202ENST00000333611 TMED10P49755 219 aaKnown RBP12.57□□□□□ -0.4
LIMK2-202ENST00000333611 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
LIMK2-202ENST00000333611 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
LIMK2-202ENST00000333611 EDRF1Q3B7T1 1238 aa12.57□□□□□ -0.4
LIMK2-202ENST00000333611 GRAMD1BQ3KR37 738 aa12.57□□□□□ -0.4
LIMK2-202ENST00000333611 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms