RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ACCSQ96QU6 501 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 HEMGNQ9BXL5 484 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 MYLK2Q9H1R3 596 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 PKD2L1Q9P0L9 805 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 LGALS13Q9UHV8 139 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 CCNHP51946 323 aaPredicted RBP25.16■■□□□ 1.62
TSKU-201ENST00000333090 CDR2Q01850 454 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 SH3BP5LQ7L8J4 393 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 SP8Q8IXZ3 490 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 CCDC127Q96BQ5 260 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 FAM167BQ9BTA0 163 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 WDR11Q9BZH6 1224 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 DCLK3Q9C098 648 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 TXLNGQ9NUQ3 528 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 A0A1W2PRG0 241 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 MYCNP04198 464 aaPredicted RBP25.15■■□□□ 1.62
TSKU-201ENST00000333090 TMEM63BQ5T3F8 832 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 CAPRIN2Q6IMN6 1127 aaKnown RBP25.15■■□□□ 1.62
TSKU-201ENST00000333090 CYP4F22Q6NT55 531 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 SLC17A8Q8NDX2 589 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 GRAMD1AQ96CP6 724 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 TMEM237Q96Q45 408 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 EIF4E1BA6NMX2 242 aaKnown RBP25.15■■□□□ 1.62
TSKU-201ENST00000333090 CALCAP01258 141 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 RRM1P23921 792 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 MAN1A1P33908 653 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 CAV1Q03135 178 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 ACVR2BQ13705 512 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 SETDB1Q15047 1291 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 CCDC174Q6PII3 467 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 SYDE1Q6ZW31 735 aaPredicted RBP25.15■■□□□ 1.62
TSKU-201ENST00000333090 DHX38Q92620 1227 aaKnown RBP25.15■■□□□ 1.62
TSKU-201ENST00000333090 CCDC77Q9BR77 488 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 SH2D3AQ9BRG2 576 aa25.15■■□□□ 1.62
TSKU-201ENST00000333090 SPAG7O75391 227 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 WDR4P57081 412 aaKnown RBP25.14■■□□□ 1.62
TSKU-201ENST00000333090 DNAJC3Q13217 504 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 TAF11Q15544 211 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 GRIPAP1Q4V328 841 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 RBM26Q5T8P6 1007 aaKnown RBP25.14■■□□□ 1.62
TSKU-201ENST00000333090 DAB2IPQ5VWQ8 1189 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 ATL2Q8NHH9 583 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 TEKT3Q9BXF9 490 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 FAM198AQ9UFP1 575 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 UBR3Q6ZT12 1888 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 FAM47DPA6NHR8 397 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 SMNDC1O75940 238 aaKnown RBP eCLIP25.14■■□□□ 1.62
TSKU-201ENST00000333090 GH2P01242 217 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 ADRB2P07550 413 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 POLR2MP0CAP2 368 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 MUTP22033 750 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 TARSP26639 723 aaKnown RBP25.14■■□□□ 1.62
TSKU-201ENST00000333090 CCDC15Q0P6D6 951 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 ACAD10Q6JQN1 1059 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 TATDN1Q6P1N9 297 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 TRMT1LQ7Z2T5 733 aaKnown RBP25.14■■□□□ 1.62
TSKU-201ENST00000333090 ANKRD35Q8N283 1001 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 SPOCK2Q92563 424 aa25.14■■□□□ 1.62
TSKU-201ENST00000333090 ZNF622Q969S3 477 aaKnown RBP eCLIP25.14■■□□□ 1.62
TSKU-201ENST00000333090 NKX1-2Q9UD57 310 aaPredicted RBP25.14■■□□□ 1.62
TSKU-201ENST00000333090 SORBS3O60504 671 aa25.14■■□□□ 1.61
TSKU-201ENST00000333090 JAG1P78504 1218 aa25.14■■□□□ 1.61
TSKU-201ENST00000333090 SAMD1Q6SPF0 538 aaPredicted RBP25.14■■□□□ 1.61
TSKU-201ENST00000333090 ZNF365Q70YC5 407 aa25.14■■□□□ 1.61
TSKU-201ENST00000333090 IPO5O00410 1097 aaKnown RBP25.13■■□□□ 1.61
TSKU-201ENST00000333090 PEX19P40855 299 aa25.13■■□□□ 1.61
TSKU-201ENST00000333090 MAIP1Q8WWC4 291 aa25.13■■□□□ 1.61
TSKU-201ENST00000333090 MOV10L1Q9BXT6 1211 aaKnown RBP25.13■■□□□ 1.61
TSKU-201ENST00000333090 QTRT2Q9H974 415 aaKnown RBP25.13■■□□□ 1.61
TSKU-201ENST00000333090 RNASELQ05823 741 aaKnown RBP25.13■■□□□ 1.61
TSKU-201ENST00000333090 CBWD2Q8IUF1 395 aa25.13■■□□□ 1.61
TSKU-201ENST00000333090 HAO1Q9UJM8 370 aa25.13■■□□□ 1.61
TSKU-201ENST00000333090 PPP1R12AO14974 1030 aaPredicted RBP25.12■■□□□ 1.61
TSKU-201ENST00000333090 POLGP54098 1239 aaPredicted RBP25.12■■□□□ 1.61
TSKU-201ENST00000333090 STAT4Q14765 748 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 IZUMO3Q5VZ72 239 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 TRIM68Q6AZZ1 485 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 KRT5P13647 590 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 HSPA1LP34931 641 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 STAT2P52630 851 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 C2CD6Q53TS8 623 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 LRRC37BQ96QE4 947 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 SLCO1B3Q9NPD5 702 aa25.12■■□□□ 1.61
TSKU-201ENST00000333090 RALAP11233 206 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 MIS18BP1Q6P0N0 1132 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 LLGL2Q6P1M3 1020 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 HAUS6Q7Z4H7 955 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 HELQQ8TDG4 1101 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 DDX1Q92499 740 aaKnown RBP25.11■■□□□ 1.61
TSKU-201ENST00000333090 KIFAP3Q92845 792 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 SAAL1Q96ER3 474 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 NAF1Q96HR8 494 aaKnown RBP25.11■■□□□ 1.61
TSKU-201ENST00000333090 PHTF1Q9UMS5 762 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 CHKBQ9Y259 395 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 ACTL7BQ9Y614 415 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 WFS1O76024 890 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 ABL2P42684 1182 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 C12orf56Q8IXR9 622 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 ZDHHC15Q96MV8 337 aa25.11■■□□□ 1.61
TSKU-201ENST00000333090 LRMDAQ9H2I8 198 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms