RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SLC11A1P49279 550 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 FXR1P51114 621 aaKnown RBP eCLIP28.18■■■□□ 2.1
SMDT1-201ENST00000331479 LRRC63Q05C16 580 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 PAK1Q13153 545 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 ZBTB6Q15916 424 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 KCNT2Q6UVM3 1135 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 ARNTL2Q8WYA1 636 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 RABGGTAQ92696 567 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 MED15Q96RN5 788 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 PAAF1Q9BRP4 392 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 ASB7Q9H672 318 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 GOLGA2P5Q9HBQ8 144 aa28.18■■■□□ 2.1
SMDT1-201ENST00000331479 EPOPA6NHQ4 379 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 CASTOR2A6NHX0 329 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 AKAP3O75969 853 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 IL18RAPO95256 599 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 TUSC3Q13454 348 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 SASS6Q6UVJ0 657 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 CD302Q8IX05 232 aa28.17■■■□□ 2.1
SMDT1-201ENST00000331479 DUSP9Q99956 384 aaKnown RBP28.17■■■□□ 2.1
SMDT1-201ENST00000331479 RPL13P26373 211 aaKnown RBP28.16■■■□□ 2.1
SMDT1-201ENST00000331479 CYP24A1Q07973 514 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 TMEM173Q86WV6 379 aaPredicted RBP28.16■■■□□ 2.1
SMDT1-201ENST00000331479 ZC3H3Q8IXZ2 948 aaKnown RBP28.16■■■□□ 2.1
SMDT1-201ENST00000331479 EFCAB13Q8IY85 973 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 MFSD14AQ96MC6 490 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 ZNF558Q96NG5 402 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 TUBGCP4Q9UGJ1 667 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 RWDD3Q9Y3V2 267 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 TMEM265A0A087WTH1 108 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 NRP1O14786 923 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 OR1G1P47890 313 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 ALDH7A1P49419 539 aaKnown RBP28.16■■■□□ 2.1
SMDT1-201ENST00000331479 FAM84AQ96KN4 292 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 SAMD11Q96NU1 681 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 TMEM175Q9BSA9 504 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 GZF1Q9H116 711 aaPredicted RBP28.16■■■□□ 2.1
SMDT1-201ENST00000331479 AAASQ9NRG9 546 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 FRMD4BQ9Y2L6 1034 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 PCDHB12Q9Y5F1 795 aa28.16■■■□□ 2.1
SMDT1-201ENST00000331479 C5orf67F2Z3F1 127 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 F8W810 466 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 ALDH2P05091 517 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 GUCY2FP51841 1108 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 FKBP3Q00688 224 aaKnown RBP28.15■■■□□ 2.1
SMDT1-201ENST00000331479 TMEM132DQ14C87 1099 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 PLEKHO2Q8TD55 490 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 SLC38A7Q9NVC3 462 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 RWDD2AQ9UIY3 292 aa28.15■■■□□ 2.1
SMDT1-201ENST00000331479 PRG3Q9Y2Y8 225 aaPredicted RBP28.15■■■□□ 2.1
SMDT1-201ENST00000331479 BICDL2A1A5D9 508 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 PSMD6Q15008 389 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 ZNF697Q5TEC3 545 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 KLHL23Q8NBE8 558 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 BCL7CQ8WUZ0 217 aaPredicted RBP28.14■■■□□ 2.1
SMDT1-201ENST00000331479 CCDC127Q96BQ5 260 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 FAM161BQ96MY7 647 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 FAN1Q9Y2M0 1017 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 DERAQ9Y315 318 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 C2CD2Q9Y426 696 aa28.14■■■□□ 2.1
SMDT1-201ENST00000331479 PTPRJQ12913 1337 aa28.14■■■□□ 2.09
SMDT1-201ENST00000331479 RFXAPO00287 272 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 CETN3O15182 167 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 IGFBP6P24592 240 aaPredicted RBP28.13■■■□□ 2.09
SMDT1-201ENST00000331479 CLCNKBP51801 687 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 LMBRD2Q68DH5 695 aaPredicted RBP28.13■■■□□ 2.09
SMDT1-201ENST00000331479 FOXR2Q6PJQ5 311 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 SLC39A11Q8N1S5 342 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 FBXO22Q8NEZ5 403 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 TSPAN18Q96SJ8 248 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 POP1Q99575 1024 aaKnown RBP28.13■■■□□ 2.09
SMDT1-201ENST00000331479 PLVAPQ9BX97 442 aa28.13■■■□□ 2.09
SMDT1-201ENST00000331479 UBQLN1Q9UMX0 589 aaKnown RBP28.13■■■□□ 2.09
SMDT1-201ENST00000331479 TRANK1O15050 2925 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 RB1P06400 928 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 TYRO3Q06418 890 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 HSP90AA2PQ14568 343 aaPredicted RBP28.12■■■□□ 2.09
SMDT1-201ENST00000331479 GRIN2CQ14957 1233 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 SPATA1Q5VX52 437 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 GPR153Q6NV75 609 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 Q7L0L9 218 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 FAM186BQ8IYM0 893 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 MARCH5Q9NX47 278 aa28.12■■■□□ 2.09
SMDT1-201ENST00000331479 SYCE3A1L190 88 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 DLATP10515 647 aaKnown RBP28.11■■■□□ 2.09
SMDT1-201ENST00000331479 PSMC2P35998 433 aaKnown RBP28.11■■■□□ 2.09
SMDT1-201ENST00000331479 TFAMQ00059 246 aaKnown RBP28.11■■■□□ 2.09
SMDT1-201ENST00000331479 STX1AQ16623 288 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 UPP1Q16831 310 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 CSGALNACT2Q8N6G5 542 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 ALG13Q9NP73 1137 aaKnown RBP28.11■■■□□ 2.09
SMDT1-201ENST00000331479 ANO10Q9NW15 660 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 SPG21Q9NZD8 308 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 DACH1Q9UI36 760 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 MAPK13O15264 365 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 FGF18O76093 207 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 ITGB1P05556 798 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 CYP3A5P20815 502 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 SURF1Q15526 300 aa28.11■■■□□ 2.09
SMDT1-201ENST00000331479 C11orf57Q6ZUT1 292 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms