RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SKIDA1Q1XH10 827 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 WDR44Q5JSH3 913 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 CCDC137Q6PK04 289 aaKnown RBP15.59■□□□□ 0.09
TPM3-206ENST00000330188 RUFY4Q6ZNE9 571 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 ZNF677Q86XU0 584 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 ANKRD35Q8N283 1001 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 NIFKQ9BYG3 293 aaKnown RBP15.59■□□□□ 0.09
TPM3-206ENST00000330188 CENPHQ9H3R5 247 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 GRHL1Q9NZI5 618 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 ATP8A1Q9Y2Q0 1164 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 PCDHB2Q9Y5E7 798 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 USP2O75604 605 aaPredicted RBP15.59■□□□□ 0.09
TPM3-206ENST00000330188 EDN1P05305 212 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 SCP2P22307 547 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 TREML2Q5T2D2 321 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 AGBL2Q5U5Z8 902 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 SPOPLQ6IQ16 392 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 LBX2Q6XYB7 198 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 DEPTORQ8TB45 409 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 AVENQ9NQS1 362 aaPredicted RBP15.59■□□□□ 0.09
TPM3-206ENST00000330188 SNCAIPQ9Y6H5 919 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 K7ERI5 159 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 PODXLO00592 558 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 ERLIN2O94905 339 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 RARAP10276 462 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 UBA1P22314 1058 aaKnown RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 MAPK4P31152 587 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 LSP1P33241 339 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 COILP38432 576 aaPredicted RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 MDH1P40925 334 aaKnown RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 RPL21P46778 160 aaKnown RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 PLTPP55058 493 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 ZBTB41Q5SVQ8 909 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 FBXO25Q8TCJ0 367 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 CPA5Q8WXQ8 436 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 SLC7A3Q8WY07 619 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 PCYT2Q99447 389 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 EPB41L4BQ9H329 900 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 RBAKQ9NYW8 714 aaPredicted RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 BTBD7Q9P203 1132 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 ANAPC7Q9UJX3 599 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 MTUS1Q9ULD2 1270 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 LRRC37A2A6NM11 1700 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 MROH7Q68CQ1 1323 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 GSTTP1A0A1W2PQM5 241 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 ZEB2O60315 1214 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 CYP1A1P04798 512 aaPredicted RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 ACO1P21399 889 aaKnown RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 HPDP32754 393 aaPredicted RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 BPIFB4P59827 614 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 SLFN12LQ6IEE8 588 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 C12orf50Q8NA57 414 aaPredicted RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 RUNDC3BQ96NL0 473 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 TARS2Q9BW92 718 aaKnown RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 TRIM7Q9C029 511 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 APOBEC3GQ9HC16 384 aaKnown RBP15.58■□□□□ 0.08
TPM3-206ENST00000330188 LRRC4CQ9HCJ2 640 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 PAPPA2Q9BXP8 1791 aa15.58■□□□□ 0.08
TPM3-206ENST00000330188 ADGRA2Q96PE1 1338 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 OTOFQ9HC10 1997 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 FARP2O94887 1054 aaPredicted RBP15.57■□□□□ 0.08
TPM3-206ENST00000330188 LDHAP00338 332 aaKnown RBP15.57■□□□□ 0.08
TPM3-206ENST00000330188 CENPCQ03188 943 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 VGLL4Q14135 290 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 TARBP2Q15633 366 aaKnown RBP15.57■□□□□ 0.08
TPM3-206ENST00000330188 RIOX2Q8IUF8 465 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 ARFGAP2Q8N6H7 521 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 CGRRF1Q99675 332 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 MSTO1Q9BUK6 570 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 FBXO40Q9UH90 709 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 CNTNAP2Q9UHC6 1331 aa15.57■□□□□ 0.08
TPM3-206ENST00000330188 A0A0B4J269 797 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 FSCN2O14926 492 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 TRIM66O15016 1216 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 MYBL1P10243 752 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 RRM1P23921 792 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 EDNRBP24530 442 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 RFC5P40937 340 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 FNTAP49354 379 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 PMS2P54278 862 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 EIF3BP55884 814 aaKnown RBP15.56■□□□□ 0.08
TPM3-206ENST00000330188 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
TPM3-206ENST00000330188 CUL2Q13617 745 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 PTGISQ16647 500 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 CCDC105Q8IYK2 499 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 TRIM11Q96F44 468 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 EPN3Q9H201 632 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 TMEM134Q9H6X4 195 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 BCCIPQ9P287 314 aaKnown RBP eCLIP15.56■□□□□ 0.08
TPM3-206ENST00000330188 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 SLC12A6Q9UHW9 1150 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 SOWAHBA6NEL2 793 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 CLDN3O15551 220 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 GBP1P32455 592 aa15.56■□□□□ 0.08
TPM3-206ENST00000330188 CAPSQ13938 189 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms