RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 TJAP1Q5JTD0 557 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 KIAA1841Q6NSI8 718 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 KANK3Q6NY19 840 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 ARMCX5Q6P1M9 558 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 ALKAL1Q6UXT8 129 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 CD302Q8IX05 232 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.17
CLRN1-203ENST00000328863 HASPINQ8TF76 798 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 HPS3Q969F9 1004 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
CLRN1-203ENST00000328863 VN1R3Q9BXE9 311 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 EMILIN2Q9BXX0 1053 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 CXCL16Q9H2A7 254 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 CACNG4Q9UBN1 327 aa16.14■□□□□ 0.17
CLRN1-203ENST00000328863 CPSF3Q9UKF6 684 aaKnown RBP16.14■□□□□ 0.17
CLRN1-203ENST00000328863 UBQLN1Q9UMX0 589 aaKnown RBP16.14■□□□□ 0.17
CLRN1-203ENST00000328863 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 HIDE1A8MVS5 230 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 TBX10O75333 385 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 B3GAT3O94766 335 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 LDHAP00338 332 aaKnown RBP16.13■□□□□ 0.17
CLRN1-203ENST00000328863 POU5F1Q01860 360 aaKnown RBP16.13■□□□□ 0.17
CLRN1-203ENST00000328863 KCNA1Q09470 495 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
CLRN1-203ENST00000328863 CTC1Q2NKJ3 1217 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 USP41Q3LFD5 358 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 HS2ST1Q7LGA3 356 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 MRPL43Q8N983 215 aaKnown RBP16.13■□□□□ 0.17
CLRN1-203ENST00000328863 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 ZMAT2Q96NC0 199 aaKnown RBP16.13■□□□□ 0.17
CLRN1-203ENST00000328863 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 PAAF1Q9BRP4 392 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 GOLGA2P5Q9HBQ8 144 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLRN1-203ENST00000328863 FAM50BQ9Y247 325 aa16.13■□□□□ 0.17
CLRN1-203ENST00000328863 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 F8W810 466 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 PODXLO00592 558 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 PER2O15055 1255 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 ZNF202O95125 648 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 CXCL14O95715 111 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 ADH1AP07327 375 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLRN1-203ENST00000328863 ACOT2P49753 483 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 CLCNKBP51801 687 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 TFF2Q03403 129 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 FAM160A1Q05DH4 1040 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 UPP1Q16831 310 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 BMT2Q1RMZ1 405 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 PUS10Q3MIT2 529 aaKnown RBP16.12■□□□□ 0.17
CLRN1-203ENST00000328863 LEXMQ3ZCV2 418 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
CLRN1-203ENST00000328863 PPFIBP1Q86W92 1011 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 GLIS3Q8NEA6 775 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 AUTS2Q8WXX7 1259 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 CASP10Q92851 521 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
CLRN1-203ENST00000328863 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
CLRN1-203ENST00000328863 TSC2P49815 1807 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 H3BQ06 376 aaPredicted RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 C2CD2LO14523 706 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 LINC01565O15544 149 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 KLRC4O43908 158 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 KIF20AO95235 890 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 IL18RAPO95256 599 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 GLP2RO95838 553 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 EFEMP2O95967 443 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 CYP3A5P20815 502 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 ADSSP30520 456 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 SNRPFP62306 86 aaKnown RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 DSG1Q02413 1049 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 SOX4Q06945 474 aaPredicted RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 PSMD2Q13200 908 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 TMEM132DQ14C87 1099 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 KMT5BQ4FZB7 885 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 ELMSAN1Q6PJG2 1045 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 BRSK2Q8IWQ3 736 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 GPR65Q8IYL9 337 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 BEST2Q8NFU1 509 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 GOLGA5Q8TBA6 731 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 CBWD1Q9BRT8 395 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 FAM213AQ9BRX8 229 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 ASB7Q9H672 318 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 SLC39A2Q9NP94 309 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 RBAKQ9NYW8 714 aaPredicted RBP16.11■□□□□ 0.17
CLRN1-203ENST00000328863 DERAQ9Y315 318 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 C2CD2Q9Y426 696 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 NUB1Q9Y5A7 615 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms