RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ITGB3P05106 788 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 EMC1Q8N766 993 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 NSRP1Q9H0G5 558 aaKnown RBP17.06■□□□□ 0.32
SYNM-201ENST00000328642 SAYSD1Q9NPB0 183 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 CYP3A4P08684 503 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 FAM153BP0C7A2 387 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 FKBP1AP62942 108 aaKnown RBP17.06■□□□□ 0.32
SYNM-201ENST00000328642 MXRA7P84157 204 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 FAM153CQ494X1 144 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 PAN2Q504Q3 1202 aaKnown RBP17.06■□□□□ 0.32
SYNM-201ENST00000328642 FAM182AQ5T1J6 154 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 PAPD7Q5XG87 772 aaKnown RBP17.06■□□□□ 0.32
SYNM-201ENST00000328642 PALB2Q86YC2 1186 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 ARL8AQ96BM9 186 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 FAM153AQ9UHL3 310 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
SYNM-201ENST00000328642 C1orf228Q6PIY5 440 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 CHST13Q8NET6 341 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 GPRC5AQ8NFJ5 357 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 CASKIN2Q8WXE0 1202 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 LENG9Q96B70 501 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
SYNM-201ENST00000328642 TNPO2O14787 897 aaKnown RBP17.05■□□□□ 0.32
SYNM-201ENST00000328642 PRPSAP2O60256 369 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 CXCL8P10145 99 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 MAN1A1P33908 653 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 MYO1EQ12965 1108 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 WHAMMQ8TF30 809 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 A8MXQ7 604 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 MAIP1Q8WWC4 291 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 KRT35Q92764 455 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 SMARCAD1Q9H4L7 1026 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 LRRC4Q9HBW1 653 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 HPCAL4Q9UM19 191 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 CAPN7Q9Y6W3 813 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 SYNGAP1Q96PV0 1343 aa17.05■□□□□ 0.32
SYNM-201ENST00000328642 A6NJR5 290 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 MIF4GDA9UHW6 222 aaKnown RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 MAFGO15525 162 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 UBA1P22314 1058 aaKnown RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 SEC24CP53992 1094 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 KRT17Q04695 432 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 GPS1Q13098 491 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 CREG2Q8IUH2 290 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 SRRM1Q8IYB3 904 aaKnown RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 DUOX1Q9NRD9 1551 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 LCP1P13796 627 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 FAM47EQ6ZV65 393 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 NACA2Q9H009 215 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 STK38LQ9Y2H1 464 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 FNDC3AQ9Y2H6 1198 aaKnown RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 EXTL3O43909 919 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 TMEM253P0C7T8 217 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 INSRRP14616 1297 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 TAOK1Q7L7X3 1001 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 NOP9Q86U38 636 aaKnown RBP17.04■□□□□ 0.32
SYNM-201ENST00000328642 ANKMY2Q8IV38 441 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 GRK7Q8WTQ7 553 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 KLRG1Q96E93 195 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 SETD4Q9NVD3 440 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 NID2Q14112 1375 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 PPP2R5EQ16537 467 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 ASAP3Q8TDY4 903 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
SYNM-201ENST00000328642 PIK3CDO00329 1044 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 NOL4O94818 638 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 KRT3P12035 628 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 ADCYAP1R1P41586 468 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 CYP24A1Q07973 514 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 AIPL1Q9NZN9 384 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 VSIG1Q86XK7 387 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 TRIM11Q96F44 468 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 ITGB4P16144 1822 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 OPLAHO14841 1288 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 ZNF862O60290 1169 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 NPTXRO95502 500 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 RALAP11233 206 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 PTGER2P43116 358 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 SPOUT1Q5T280 376 aaKnown RBP17.03■□□□□ 0.32
SYNM-201ENST00000328642 BSNDQ8WZ55 320 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 ACAP3Q96P50 834 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 RASSF4Q9H2L5 321 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 HES2Q9Y543 173 aa17.03■□□□□ 0.32
SYNM-201ENST00000328642 EXOC1LA0A1B0GW35 172 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 ASB14A6NK59 587 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms