RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 SLC38A7Q9NVC3 462 aa23.61■■□□□ 1.37
TNRC18-201ENST00000328270 FAM50BQ9Y247 325 aa23.61■■□□□ 1.37
TNRC18-201ENST00000328270 SSX2IPQ9Y2D8 614 aa23.61■■□□□ 1.37
TNRC18-201ENST00000328270 TISP43B9A030 160 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 MBTPS2O43462 519 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 CNPP09543 421 aaKnown RBP23.6■■□□□ 1.37
TNRC18-201ENST00000328270 PFKFB1P16118 471 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 CMA1P23946 247 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 NUCB2P80303 420 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 DSG1Q02413 1049 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 KCNA1Q09470 495 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 ZBTB41Q5SVQ8 909 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 L1TD1Q5T7N2 865 aaKnown RBP23.6■■□□□ 1.37
TNRC18-201ENST00000328270 KIAA0319Q5VV43 1072 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 KIAA1841Q6NSI8 718 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 CNNM4Q6P4Q7 775 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 SMRP1Q8NCR6 262 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 CASP10Q92851 521 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 UROC1Q96N76 676 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 ACCSQ96QU6 501 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 C7orf25Q9BPX7 421 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 EMILIN2Q9BXX0 1053 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 CHST7Q9NS84 486 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 PCDHB13Q9Y5F0 798 aa23.6■■□□□ 1.37
TNRC18-201ENST00000328270 MTCL1Q9Y4B5 1905 aaKnown RBP23.6■■□□□ 1.37
TNRC18-201ENST00000328270 A0A1B0GVL5 298 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 TMEM189-UBE2V1I3L0A0 370 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 CLCNKBP51801 687 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 ALCAMQ13740 583 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 USP41Q3LFD5 358 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 SLFN12LQ6IEE8 588 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 ANKRD54Q6NXT1 300 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 KLHL5Q96PQ7 755 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 PLEKHA5Q9HAU0 1116 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 EXOC7Q9UPT5 735 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 STYXL1Q9Y6J8 313 aa23.59■■□□□ 1.37
TNRC18-201ENST00000328270 TTC26A0AVF1 554 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 B3GAT3O94766 335 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 ENOX2Q16206 610 aaKnown RBP23.58■■□□□ 1.37
TNRC18-201ENST00000328270 UPP1Q16831 310 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 DCLRE1AQ6PJP8 1040 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 PPFIBP1Q86W92 1011 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 CEP57L1Q8IYX8 460 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 SLC22A17Q8WUG5 538 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 HPS3Q969F9 1004 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 C18orf25Q96B23 403 aaPredicted RBP23.58■■□□□ 1.37
TNRC18-201ENST00000328270 RPF1Q9H9Y2 349 aaKnown RBP23.58■■□□□ 1.37
TNRC18-201ENST00000328270 GDPD2Q9HCC8 539 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 SERTAD1Q9UHV2 236 aa23.58■■□□□ 1.37
TNRC18-201ENST00000328270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 ACTN4O43707 911 aaKnown RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 SLFN14P0C7P3 912 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 EPCAMP16422 314 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 IGFBP6P24592 240 aaPredicted RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 KLRC2P26717 231 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 CASP1P29466 404 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 AFMP43652 599 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 PPP2R3AQ06190 1150 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 ELAVL2Q12926 359 aaKnown RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 SMAD2Q15796 467 aaKnown RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 FAM171A1Q5VUB5 890 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 SYCE2Q6PIF2 218 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 GRAMD1CQ8IYS0 662 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 C3orf58Q8NDZ4 430 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 RIN2Q8WYP3 895 aaPredicted RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 POMGNT1Q8WZA1 660 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 DDX27Q96GQ7 796 aaKnown RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 BLZF1Q9H2G9 400 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 RXFP1Q9HBX9 757 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 CPSF3Q9UKF6 684 aaKnown RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 AGO2Q9UKV8 859 aaKnown RBP23.57■■□□□ 1.36
TNRC18-201ENST00000328270 HPSEQ9Y251 543 aa23.57■■□□□ 1.36
TNRC18-201ENST00000328270 PODXLO00592 558 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 TEX28O15482 410 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 PRPF6O94906 941 aaKnown RBP23.56■■□□□ 1.36
TNRC18-201ENST00000328270 SPAG1Q07617 926 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 RTP2Q5QGT7 225 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 GPR65Q8IYL9 337 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 SYCP3Q8IZU3 236 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 GLIS3Q8NEA6 775 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 TUBGCP4Q9UGJ1 667 aa23.56■■□□□ 1.36
TNRC18-201ENST00000328270 USP15Q9Y4E8 981 aaPredicted RBP23.56■■□□□ 1.36
TNRC18-201ENST00000328270 LACTBL1A8MY62 500 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 ADH1AP07327 375 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 HOXB8P17481 243 aaPredicted RBP23.55■■□□□ 1.36
TNRC18-201ENST00000328270 ADSSP30520 456 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 RPL9P32969 192 aaKnown RBP23.55■■□□□ 1.36
TNRC18-201ENST00000328270 ACOT2P49753 483 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 CLCN4P51793 760 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 CUL4BQ13620 913 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 POSTNQ15063 836 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 TPRNQ4KMQ1 711 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 FAM26FQ5R3K3 315 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 CD300LGQ6UXG3 332 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 STXBP4Q6ZWJ1 553 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 UNC13DQ70J99 1090 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 KIF12Q96FN5 646 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 TTPALQ9BTX7 342 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 APOL5Q9BWW9 433 aa23.55■■□□□ 1.36
TNRC18-201ENST00000328270 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms