RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 LRRC4BQ9NT99 713 aa17.83■□□□□ 0.45
SSH1-201ENST00000326470 HSPBP1Q9NZL4 362 aa17.83■□□□□ 0.45
SSH1-201ENST00000326470 PI4KBQ9UBF8 816 aa17.83■□□□□ 0.45
SSH1-201ENST00000326470 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.45
SSH1-201ENST00000326470 MAPTP10636 758 aaKnown RBP17.83■□□□□ 0.44
SSH1-201ENST00000326470 GNAZP19086 355 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 WDR4P57081 412 aaKnown RBP17.83■□□□□ 0.44
SSH1-201ENST00000326470 ACAD10Q6JQN1 1059 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 TATDN1Q6P1N9 297 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 FAM47EQ6ZV65 393 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 AGGF1Q8N302 714 aaeCLIP17.83■□□□□ 0.44
SSH1-201ENST00000326470 NAF1Q96HR8 494 aaKnown RBP17.83■□□□□ 0.44
SSH1-201ENST00000326470 ACCSQ96QU6 501 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 HERPUD2Q9BSE4 406 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 ARHGEF10LQ9HCE6 1279 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 LARSQ9P2J5 1176 aaKnown RBP17.83■□□□□ 0.44
SSH1-201ENST00000326470 NEU2Q9Y3R4 380 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 MYH11P35749 1972 aa17.83■□□□□ 0.44
SSH1-201ENST00000326470 DDTLA6NHG4 134 aaPredicted RBP17.82■□□□□ 0.44
SSH1-201ENST00000326470 RASA4BC9J798 803 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 RASA4O43374 803 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
SSH1-201ENST00000326470 LMNB2Q03252 620 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 ADCY1Q08828 1119 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 TAF11Q15544 211 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 RIBC1Q8N443 379 aaPredicted RBP17.82■□□□□ 0.44
SSH1-201ENST00000326470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.82■□□□□ 0.44
SSH1-201ENST00000326470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.82■□□□□ 0.44
SSH1-201ENST00000326470 KIF3CO14782 793 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 MAPK4P31152 587 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 ABL2P42684 1182 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 TCP10Q12799 353 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 B3GNT9Q6UX72 402 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 VSIG1Q86XK7 387 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 BBOF1Q8ND07 529 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 ZSWIM2Q8NEG5 633 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 MAML1Q92585 1016 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 TMEM237Q96Q45 408 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 RNPEPL1Q9HAU8 725 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 NKX1-2Q9UD57 310 aaPredicted RBP17.82■□□□□ 0.44
SSH1-201ENST00000326470 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 USH1CQ9Y6N9 552 aa17.82■□□□□ 0.44
SSH1-201ENST00000326470 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 E7ENQ6 273 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 ASMTLO95671 621 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 CFBP00751 764 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 CENPCQ03188 943 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 CEP55Q53EZ4 464 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 KIAA0825Q8IV33 1275 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 DDX1Q92499 740 aaKnown RBP17.81■□□□□ 0.44
SSH1-201ENST00000326470 INPP5DQ92835 1189 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 ERP27Q96DN0 273 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 CHKBQ9Y259 395 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 LRRC42Q9Y546 428 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 RBBP6Q7Z6E9 1792 aaKnown RBP17.81■□□□□ 0.44
SSH1-201ENST00000326470 A6NHS1 94 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 SERPINB2P05120 415 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 ABHD2P08910 425 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 CALB2P22676 271 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 VPS41P49754 854 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 MAEAQ7L5Y9 396 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 TEX9Q8N6V9 391 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 KCNV2Q8TDN2 545 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 SEMA4DQ92854 862 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 C9orf72Q96LT7 481 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 LRRC37BQ96QE4 947 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 ZNF577Q9BSK1 485 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 R3HDM2Q9Y2K5 976 aaKnown RBP17.81■□□□□ 0.44
SSH1-201ENST00000326470 SIPA1L1O43166 1804 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
SSH1-201ENST00000326470 RRM1P23921 792 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 CACNB3P54284 484 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 MCCD1P59942 119 aaPredicted RBP17.8■□□□□ 0.44
SSH1-201ENST00000326470 NR1H3Q13133 447 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 MOGSQ13724 837 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 RGS9BPQ6ZS82 235 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSH1-201ENST00000326470 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 CCDC89Q8N998 374 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 HELQQ8TDG4 1101 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 SAAL1Q96ER3 474 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 UBN1Q9NPG3 1134 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 PHTF1Q9UMS5 762 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 PEX11AO75192 247 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 GDF11O95390 407 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 ARP10275 920 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 SLC1A1P43005 524 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 CRKP46108 304 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 UBXN2AP68543 259 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 TMED2Q15363 201 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 CLEC16AQ2KHT3 1053 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 ABCB5Q2M3G0 1257 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 SH3BP5LQ7L8J4 393 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 KIFAP3Q92845 792 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 PAIP2Q9BPZ3 127 aaKnown RBP17.8■□□□□ 0.44
SSH1-201ENST00000326470 TEKT3Q9BXF9 490 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms