RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 FOXP3Q9BZS1 431 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 ZCCHC17Q9NP64 241 aaKnown RBP22.14■■□□□ 1.13
RNF40-201ENST00000324685 CDH16O75309 829 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 GRIN1Q05586 938 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 KDSRQ06136 332 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 AGR3Q8TD06 166 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 KRT35Q92764 455 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 WDR24Q96S15 920 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 MRPL1Q9BYD6 325 aaKnown RBP22.14■■□□□ 1.13
RNF40-201ENST00000324685 ADNPQ9H2P0 1102 aa22.14■■□□□ 1.13
RNF40-201ENST00000324685 USP15Q9Y4E8 981 aaPredicted RBP22.14■■□□□ 1.13
RNF40-201ENST00000324685 MMP10P09238 476 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 YWHABP31946 246 aaKnown RBP22.13■■□□□ 1.13
RNF40-201ENST00000324685 MRPL28Q13084 256 aaKnown RBP22.13■■□□□ 1.13
RNF40-201ENST00000324685 STX3Q13277 289 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 CCDC85BQ15834 202 aaPredicted RBP22.13■■□□□ 1.13
RNF40-201ENST00000324685 POTEAQ6S8J7 498 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 TBC1D19Q8N5T2 526 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 ARMC2Q8NEN0 867 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 SLC35G2Q8TBE7 412 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 C21orf2O43822 256 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 TRIM60Q495X7 471 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 TEX9Q8N6V9 391 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 NEDD1Q8NHV4 660 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 C18orf8Q96DM3 657 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 DCUN1D1Q96GG9 259 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 MAP3K20Q9NYL2 800 aaKnown RBP22.13■■□□□ 1.13
RNF40-201ENST00000324685 KIF1BO60333 1816 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 COL15A1P39059 1388 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 CYTH1Q15438 398 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 ARHGEF26Q96DR7 871 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 PPP1R2P1Q96PQ5 205 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 NSMCE4AQ9NXX6 385 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 PIM2Q9P1W9 311 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 TJP2Q9UDY2 1190 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 SRP72O76094 671 aaKnown RBP22.13■■□□□ 1.13
RNF40-201ENST00000324685 SRGNP10124 158 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 CYP2C19P33261 490 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 DMC1Q14565 340 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 ADCK1Q86TW2 530 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 METTL16Q86W50 562 aaKnown RBP22.13■■□□□ 1.13
RNF40-201ENST00000324685 TTC30BQ8N4P2 665 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 ATXN7L3BQ96GX2 97 aa22.13■■□□□ 1.13
RNF40-201ENST00000324685 STXBP3O00186 592 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 FOXN1O15353 648 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 CARSP49589 748 aaKnown RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 PRUNE1Q86TP1 453 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 MFN1Q8IWA4 741 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 CLMNQ96JQ2 1002 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 CCSER1Q9C0I3 900 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 DDX28Q9NUL7 540 aaKnown RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 PRDM15P57071 1507 aaPredicted RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 PDAP1Q13442 181 aaKnown RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 TSR3Q9UJK0 312 aaKnown RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 CFAP65Q6ZU64 1925 aaKnown RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 EIF3HO15372 352 aaKnown RBP eCLIP22.12■■□□□ 1.134e-7■□□□□ 8.7
RNF40-201ENST00000324685 VEPH1Q14D04 833 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 ALG13Q9NP73 1137 aaKnown RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 HSPBP1Q9NZL4 362 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 TBC1D4O60343 1298 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 PRKCBP05771 671 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 THAP11Q96EK4 314 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 ASB14A6NK59 587 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 SMAPO00193 183 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 SEC24DO94855 1032 aaPredicted RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 KLHL2O95198 593 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 CPB1P15086 417 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 SESN2P58004 480 aaPredicted RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 NKX1-1Q15270 411 aaPredicted RBP22.12■■□□□ 1.13
RNF40-201ENST00000324685 RASGRP2Q7LDG7 609 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 TTC30AQ86WT1 665 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 RBM15Q96T37 977 aaKnown RBP eCLIP22.12■■□□□ 1.13
RNF40-201ENST00000324685 C7orf25Q9BPX7 421 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 BLOC1S6Q9UL45 172 aa22.12■■□□□ 1.13
RNF40-201ENST00000324685 TLR2O60603 784 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 SPAG6O75602 509 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 MAP4P27816 1152 aaKnown RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 NLRP11P59045 1033 aaKnown RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 ANO4Q32M45 955 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 DYRK4Q9NR20 520 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 HSPA1AP0DMV8 641 aaKnown RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 HSPA1BP0DMV9 641 aaKnown RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 PIGHQ14442 188 aaPredicted RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 SH3GL3Q99963 347 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 CYFIP1Q7L576 1253 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 CCDC134Q9H6E4 229 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 NPHS2Q9NP85 383 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 BATF3Q9NR55 127 aa22.11■■□□□ 1.13
RNF40-201ENST00000324685 ZC3H7BQ9UGR2 993 aaKnown RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 XPO7Q9UIA9 1087 aaKnown RBP22.11■■□□□ 1.13
RNF40-201ENST00000324685 C5orf58C9J3I9 102 aa22.1■■□□□ 1.13
RNF40-201ENST00000324685 MTF1Q14872 753 aa22.1■■□□□ 1.13
RNF40-201ENST00000324685 PCDHB8Q9UN66 801 aa22.1■■□□□ 1.13
RNF40-201ENST00000324685 HIST1H2AGP0C0S8 130 aaPredicted RBP22.1■■□□□ 1.13
RNF40-201ENST00000324685 HIST1H2ADP20671 130 aa22.1■■□□□ 1.13
RNF40-201ENST00000324685 ACBD5Q5T8D3 534 aaPredicted RBP22.1■■□□□ 1.13
RNF40-201ENST00000324685 HIST1H2AHQ96KK5 128 aa22.1■■□□□ 1.13
RNF40-201ENST00000324685 HIST1H2AJQ99878 128 aa22.1■■□□□ 1.13
RNF40-201ENST00000324685 H2AFJQ9BTM1 129 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms