RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CYP2C9P11712 490 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 MFAP3P55082 362 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 AMPD2Q01433 879 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 BMS1Q14692 1282 aaKnown RBP19.85■□□□□ 0.77
USP39-201ENST00000323701 NOP9Q86U38 636 aaKnown RBP19.85■□□□□ 0.77
USP39-201ENST00000323701 DNAJB3Q8WWF6 145 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 CARD6Q9BX69 1037 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 DAAM1Q9Y4D1 1078 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 ZEB2O60315 1214 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 SLU7O95391 586 aaKnown RBP19.85■□□□□ 0.77
USP39-201ENST00000323701 CHRNB2P17787 502 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 SP3Q02447 781 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 EPS8L1Q8TE68 723 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 OSMRQ99650 979 aa19.85■□□□□ 0.77
USP39-201ENST00000323701 CCND3P30281 292 aaPredicted RBP19.84■□□□□ 0.77
USP39-201ENST00000323701 GNASQ5JWF2 1037 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 TAF3Q5VWG9 929 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 TMEM40Q8WWA1 233 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 CREBZFQ9NS37 354 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 NOCTQ9UK39 431 aaKnown RBP19.84■□□□□ 0.77
USP39-201ENST00000323701 NUB1Q9Y5A7 615 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 HOXA11P31270 313 aaPredicted RBP19.84■□□□□ 0.77
USP39-201ENST00000323701 MFSD14CQ5VZR4 134 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 CXCL17Q6UXB2 119 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 WDR49Q8IV35 697 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 PCDHB18PQ96TA0 734 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 AGPAT1Q99943 283 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 CXCL16Q9H2A7 254 aa19.84■□□□□ 0.77
USP39-201ENST00000323701 SMIM35A0A1B0GVV1 85 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 SRGAP2O75044 1071 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 STAG3L1P0CL83 205 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 GJA9P57773 515 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 GCNT1Q02742 428 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 NCOA4Q13772 614 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 TRAPPC11Q7Z392 1133 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 ZNF410Q86VK4 478 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 C1orf112Q9NSG2 853 aa19.83■□□□□ 0.77
USP39-201ENST00000323701 A0A1B0GUA9 196 aa19.83■□□□□ 0.76
USP39-201ENST00000323701 TFAMQ00059 246 aaKnown RBP19.83■□□□□ 0.76
USP39-201ENST00000323701 SEPT11Q9NVA2 429 aaKnown RBP19.83■□□□□ 0.76
USP39-201ENST00000323701 ZC3H11AO75152 810 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP39-201ENST00000323701 NFICP08651 508 aa19.82■□□□□ 0.76
USP39-201ENST00000323701 ANXA13P27216 316 aa19.82■□□□□ 0.76
USP39-201ENST00000323701 HOXC8P31273 242 aa19.82■□□□□ 0.76
USP39-201ENST00000323701 MYL6P60660 151 aa19.82■□□□□ 0.76
USP39-201ENST00000323701 RPUSD2Q8IZ73 545 aaKnown RBP19.82■□□□□ 0.76
USP39-201ENST00000323701 CD99L2Q8TCZ2 262 aa19.82■□□□□ 0.76
USP39-201ENST00000323701 LACTBL1A8MY62 500 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 SEPT4O43236 478 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 NCK2O43639 380 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 PHACTR2O75167 634 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 ERLIN2O94905 339 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 MMEP08473 750 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 MCF2P10911 925 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 PRKAR2AP13861 404 aaKnown RBP19.81■□□□□ 0.76
USP39-201ENST00000323701 ACO1P21399 889 aaKnown RBP19.81■□□□□ 0.76
USP39-201ENST00000323701 TNFAIP3P21580 790 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 APLP1P51693 650 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 GALCP54803 685 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 NOP14P78316 857 aaKnown RBP19.81■□□□□ 0.76
USP39-201ENST00000323701 NCBP1Q09161 790 aaKnown RBP19.81■□□□□ 0.76
USP39-201ENST00000323701 SRGAP1Q7Z6B7 1085 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 VPS36Q86VN1 386 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 GOLPH3Q9H4A6 298 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 CDC23Q9UJX2 597 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 B4GALT4O60513 344 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 CYP11B1P15538 503 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 SLC10A6Q3KNW5 377 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 WDR44Q5JSH3 913 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 TRIM58Q8NG06 486 aa19.81■□□□□ 0.76
USP39-201ENST00000323701 DDX1Q92499 740 aaKnown RBP19.81■□□□□ 0.76
USP39-201ENST00000323701 ADAMTS4O75173 837 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 CCDC172P0C7W6 258 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 KRT5P13647 590 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 FMO1Q01740 532 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 CUL2Q13617 745 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 DUOXA2Q1HG44 320 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 PAPD7Q5XG87 772 aaKnown RBP19.8■□□□□ 0.76
USP39-201ENST00000323701 C7orf31Q8N865 590 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 RPF1Q9H9Y2 349 aaKnown RBP19.8■□□□□ 0.76
USP39-201ENST00000323701 SCN10AQ9Y5Y9 1956 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 C17orf102A2RUQ5 167 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 ZNF185O15231 689 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 TACC1O75410 805 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 PALMO75781 387 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 ASS1P00966 412 aaKnown RBP19.8■□□□□ 0.76
USP39-201ENST00000323701 CLTAP09496 248 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 DARSP14868 501 aaKnown RBP19.8■□□□□ 0.76
USP39-201ENST00000323701 ABCB4P21439 1286 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 VEGFBP49765 207 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 NAP1L1P55209 391 aaKnown RBP19.8■□□□□ 0.76
USP39-201ENST00000323701 ERCC6LQ2NKX8 1250 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 NBPF20Q3BBV1 942 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 C10orf76Q5T2E6 689 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 WNT8BQ93098 351 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 VTI1AQ96AJ9 217 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 ARHGEF26Q96DR7 871 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 ERO1AQ96HE7 468 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 NOX5Q96PH1 765 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 EIF2AQ9BY44 585 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms