RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 UTP11Q9Y3A2 253 aaKnown RBP23.3■■□□□ 1.32
SPHK1-201ENST00000323374 CNTNAP2Q9UHC6 1331 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 TTI1O43156 1089 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 ECHS1P30084 290 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 PPFIA1Q13136 1202 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 MXD4Q14582 209 aaPredicted RBP23.3■■□□□ 1.32
SPHK1-201ENST00000323374 SPOPLQ6IQ16 392 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 DPY19L2Q6NUT2 758 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 ATP8B4Q8TF62 1192 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 ZIM3Q96PE6 472 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 MROH8Q9H579 483 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 NR2E1Q9Y466 385 aa23.3■■□□□ 1.32
SPHK1-201ENST00000323374 GOLGA6CA6NDK9 693 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 SPOPO43791 374 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 GOLGA6DP0CG33 693 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 HARSP12081 509 aaKnown RBP23.29■■□□□ 1.32
SPHK1-201ENST00000323374 UNGP13051 313 aaPredicted RBP23.29■■□□□ 1.32
SPHK1-201ENST00000323374 HSPA6P17066 643 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 PEX5P50542 639 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 CUL2Q13617 745 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 DHX37Q8IY37 1157 aaKnown RBP23.29■■□□□ 1.32
SPHK1-201ENST00000323374 IQCKQ8N0W5 287 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 CD101Q93033 1021 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 GOLGA6AQ9NYA3 693 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 CCDC66A2RUB6 948 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 HSPA9P38646 679 aaKnown RBP23.29■■□□□ 1.32
SPHK1-201ENST00000323374 LAMTOR4Q0VGL1 99 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 SEL1L2Q5TEA6 688 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 WDR78Q5VTH9 848 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 CDCA2Q69YH5 1023 aaPredicted RBP23.29■■□□□ 1.32
SPHK1-201ENST00000323374 ARMC9Q7Z3E5 817 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 TRIM50Q86XT4 487 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 ZBTB8OSQ8IWT0 167 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 SEC14L1Q92503 715 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 SPATA33Q96N06 139 aa23.29■■□□□ 1.32
SPHK1-201ENST00000323374 APOBEC3GQ9HC16 384 aaKnown RBP23.29■■□□□ 1.32
SPHK1-201ENST00000323374 MSCO60682 206 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 TOM1L1O75674 476 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 CALCAP01258 141 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 ACO1P21399 889 aaKnown RBP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 CTNNA1P35221 906 aaKnown RBP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 MARCKSL1P49006 195 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 GPAT2Q6NUI2 795 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 ADAT2Q7Z6V5 191 aaKnown RBP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 DDX42Q86XP3 938 aaKnown RBP eCLIP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 FBXO16Q8IX29 292 aaPredicted RBP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 FAM76AQ8TAV0 307 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 TRIM11Q96F44 468 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 L3MBTL3Q96JM7 780 aaPredicted RBP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 BTBD6Q96KE9 485 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 CELF4Q9BZC1 486 aaKnown RBP23.28■■□□□ 1.32
SPHK1-201ENST00000323374 CCDC113Q9H0I3 377 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 FAM114A2Q9NRY5 505 aa23.28■■□□□ 1.32
SPHK1-201ENST00000323374 IGKV6-21A0A0C4DH24 114 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 SRGAP2CP0DJJ0 459 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 CAPN2P17655 700 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 TBXAS1P24557 533 aaPredicted RBP23.27■■□□□ 1.32
SPHK1-201ENST00000323374 CTNNA2P26232 953 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 EPHX2P34913 555 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 AP3M2P53677 418 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 MKRN4PQ13434 485 aaPredicted RBP23.27■■□□□ 1.32
SPHK1-201ENST00000323374 BRSK2Q8IWQ3 736 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 OR5B17Q8NGF7 314 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 JPH2Q9BR39 696 aaPredicted RBP23.27■■□□□ 1.32
SPHK1-201ENST00000323374 TCHPQ9BT92 498 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 RAB17Q9H0T7 212 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 ZBTB42B2RXF5 422 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 DAPK3O43293 454 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 MYBL1P10243 752 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 DR1Q01658 176 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 PLCB4Q15147 1175 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 SEZ6Q53EL9 994 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 MCOLN2Q8IZK6 566 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 RNF149Q8NC42 400 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 LRRC45Q96CN5 670 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 C2orf40Q9H1Z8 148 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 ERVK-5Q9HDB9 667 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 AVENQ9NQS1 362 aaPredicted RBP23.27■■□□□ 1.32
SPHK1-201ENST00000323374 PCDHB4Q9Y5E5 795 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 PCDHA3Q9Y5H8 950 aa23.27■■□□□ 1.32
SPHK1-201ENST00000323374 LOC102724159A0A0B4J2E5 919 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 TTLL13PA6NNM8 815 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 CLTAP09496 248 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 SLC26A2P50443 739 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 NOP14P78316 857 aaKnown RBP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 GRM1Q13255 1194 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 DHX34Q14147 1143 aaKnown RBP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 PWP2Q15269 919 aaKnown RBP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 MAPK6Q16659 721 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 AADACL2Q6P093 401 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 CCDC62Q6P9F0 684 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 LRRC71Q8N4P6 559 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 ACO2Q99798 780 aaKnown RBP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.26■■□□□ 1.319e-8■■□□□ 11.9
SPHK1-201ENST00000323374 CYP1A1P04798 512 aaPredicted RBP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 PRKCBP05771 671 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 NSFP46459 744 aaKnown RBP23.26■■□□□ 1.31
SPHK1-201ENST00000323374 NCOA4Q13772 614 aa23.26■■□□□ 1.31
SPHK1-201ENST00000323374 ZBTB33Q86T24 672 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms