RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 APTXQ7Z2E3 356 aaKnown RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 C4orf19Q8IY42 314 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 GPRC5AQ8NFJ5 357 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ZIM3Q96PE6 472 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 KCTD10Q9H3F6 313 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 SALL4Q9UJQ4 1053 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 PHLPP1O60346 1717 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 TLR2O60603 784 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CXCL8P10145 99 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 KRT3P12035 628 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 PBX1P40424 430 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 KRT17Q04695 432 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ITIH3Q06033 890 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ZRSR2Q15696 482 aaKnown RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ANO5Q75V66 913 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ANKMY2Q8IV38 441 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CACNA2D3Q8IZS8 1091 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CEP120Q8N960 986 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ARL8AQ96BM9 186 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ADARB2Q9NS39 739 aaKnown RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 HOMER3Q9NSC5 361 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 BAIAP2L1Q9UHR4 511 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 DBR1Q9UK59 544 aaKnown RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 SNED1Q8TER0 1413 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 M0R2N6 131 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 MCF2LO15068 1137 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 CREB3O43889 395 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ADRB2P07550 413 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 MYBL2P10244 700 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 NME3Q13232 169 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 PRAMEF19Q5SWL8 479 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 MRIQ9BWK5 157 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 ALG13Q9NP73 1137 aaKnown RBP11.7□□□□□ -0.54
TOP3A-201ENST00000321105 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
TOP3A-201ENST00000321105 GOLGA8RI6L899 631 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 FAM153BP0C7A2 387 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 FAM153CQ494X1 144 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 TTC31Q49AM3 519 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-201ENST00000321105 FAM182AQ5T1J6 154 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 GKAP1Q5VSY0 366 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-201ENST00000321105 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 FAM153AQ9UHL3 310 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 HPCAL4Q9UM19 191 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 NFKBIEO00221 500 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 MAFGO15525 162 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 CDH6P55285 790 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 MEA1Q16626 185 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 PAPD7Q5XG87 772 aaKnown RBP11.69□□□□□ -0.54
TOP3A-201ENST00000321105 PALB2Q86YC2 1186 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 GPATCH11Q8N954 259 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 CCDC110Q8TBZ0 833 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 PARD3BQ8TEW8 1205 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 CASKIN2Q8WXE0 1202 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 KRT35Q92764 455 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 CFAP36Q96G28 342 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
TOP3A-201ENST00000321105 SETD4Q9NVD3 440 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 VGLL3A8MV65 326 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-201ENST00000321105 RALAP11233 206 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 CLUL1Q15846 466 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 KYNUQ16719 465 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
TOP3A-201ENST00000321105 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 TRIM7Q9C029 511 aa11.69□□□□□ -0.54
TOP3A-201ENST00000321105 MED7O43513 233 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 EXTL3O43909 919 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 NPTXRO95502 500 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 INSRRP14616 1297 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 UBA1P22314 1058 aaKnown RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 EFNA5P52803 228 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 CUL1Q13616 776 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 LONRF1Q17RB8 773 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 NUGGCQ68CJ6 796 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 CREG2Q8IUH2 290 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ELAC2Q9BQ52 826 aaKnown RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 PDGFCQ9NRA1 345 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SMYD2Q9NRG4 433 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ERAP1Q9NZ08 941 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 HES2Q9Y543 173 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 FRMPD4Q14CM0 1322 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 CYP3A7-CYP3A51PA0A087WV96 503 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ASB14A6NK59 587 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ZBTB22O15209 634 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 CLTAP09496 248 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms