RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PLPP7Q8NBV4 271 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 HERVK_113Q902F9 699 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 CLIC6Q96NY7 704 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 RNPEPQ9H4A4 650 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 SLC38A7Q9NVC3 462 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 DMAC2Q9NW81 257 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 RGL1Q9NZL6 768 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 WRAP73Q9P2S5 460 aaPredicted RBP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 TBX20Q9UMR3 447 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 NOD1Q9Y239 953 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 HCN4Q9Y3Q4 1203 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 GRIN2DO15399 1336 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 A0A087X0B3 334 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 A0A1B0GUA9 196 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 A0A1B0GVL5 298 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 RSPH10B2B2RC85 870 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 E9PMD0 336 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 DDX39AO00148 427 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 MSTNO14793 375 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 EXTL3O43909 919 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 PRKCBP05771 671 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 RSPH10BP0C881 870 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 ZNF286BP0CG31 522 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 CKBP12277 381 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 NPTX2P47972 431 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 PAK1Q13153 545 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 PRAMEF19Q5SWL8 479 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 RASIP1Q5U651 963 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 LRSAM1Q6UWE0 723 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 INTS8Q75QN2 995 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 EEPD1Q7L9B9 569 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 CMTR2Q8IYT2 770 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 DAW1Q8N136 415 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 FUCA2Q9BTY2 467 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 RUSC1Q9BVN2 902 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 EDEM3Q9BZQ6 932 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 ZCCHC2Q9C0B9 1178 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 GBP3Q9H0R5 595 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 LMAN2LQ9H0V9 348 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 VRTNQ9H8Y1 702 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 PTPRHQ9HD43 1115 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 TOPORSQ9NS56 1045 aaPredicted RBP3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 FBXL5Q9UKA1 691 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 MYO6Q9UM54 1294 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 C2CD2Q9Y426 696 aa3.59□□□□□ -1.83
SCAMP1-201ENST00000320280 MYADML2A6NDP7 307 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 K7ENM7 598 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 OGTO15294 1046 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 B4GALT4O60513 344 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 PEX10O60683 326 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 USO1O60763 962 aaKnown RBP3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 ERLIN2O94905 339 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 ARHGEF15O94989 841 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 PGK1P00558 417 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 TPM3P06753 285 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 POU2F2P09086 479 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 CLTAP09496 248 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 KCNE1P15382 129 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 FGFR3P22607 806 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 ANXA13P27216 316 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 ATICP31939 592 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 PNPLA4P41247 253 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 FKBP3Q00688 224 aaKnown RBP3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 FAAP100Q0VG06 881 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 MTFR1Q15390 333 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 NFKBIBQ15653 356 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 CXCL17Q6UXB2 119 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 HAUS6Q7Z4H7 955 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 MYCT1Q8N699 235 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 GPT2Q8TD30 523 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 P2RX5Q93086 422 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 ACO2Q99798 780 aaKnown RBP3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 FTOQ9C0B1 505 aaKnown RBP eCLIP3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 GRIP2Q9C0E4 1043 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 KCTD10Q9H3F6 313 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM161AQ9NX61 479 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 MAN1B1Q9UKM7 699 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 SSX2IPQ9Y2D8 614 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 CDY2AQ9Y6F7 541 aa3.59□□□□□ -1.84
SCAMP1-201ENST00000320280 K7ERI5 159 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CBFA2T2O43439 604 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 AMHP03971 560 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 IQCF3P0C7M6 154 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ZSCAN20P17040 1043 aaPredicted RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 LIG1P18858 919 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 RPL9P32969 192 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CYP4A11Q02928 519 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 UBE3AQ05086 875 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 GRIN1Q05586 938 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 KCNMA1Q12791 1236 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PRPF4BQ13523 1007 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CUL4BQ13620 913 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM14Q14142 442 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 NOLC1Q14978 699 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 HERC4Q5GLZ8 1057 aaPredicted RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 GJC2Q5T442 439 aaPredicted RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM102BQ5T8I3 360 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 SPATA1Q5VX52 437 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM173BQ6P4H8 233 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms