RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 ATP9BO43861 1147 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 CCNT1O60563 726 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 TDP2O95551 362 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 CLTAP09496 248 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 RHOXF2BP0C7M4 288 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 CKBP12277 381 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 ATP2A2P16615 1042 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 CCNG1P51959 295 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 POLE2P56282 527 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 ARPC4P59998 168 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 KRT76Q01546 638 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 TCTN1Q2MV58 587 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 DHX40Q8IX18 779 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 SLC15A3Q8IY34 581 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 SLFN12Q8IYM2 578 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 USP33Q8TEY7 942 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 RHOXF2Q9BQY4 288 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 KATNAL1Q9BW62 490 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 MTIF3Q9H2K0 278 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 TUT1Q9H6E5 874 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 TCEAL9Q9UHQ7 104 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 L3MBTL1Q9Y468 752 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 TMEM247A6NEH6 219 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 LSM1O15116 133 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 KDM1AO60341 852 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 LGR5O75473 907 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 GHRP10912 638 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 CCND1P24385 295 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 HOXD12P35452 270 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 SMUG1Q53HV7 270 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 LRRC8DQ7L1W4 858 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 ERICH1Q86X53 443 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 EHBP1Q8NDI1 1231 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
KARS-202ENST00000319410 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 CERS4Q9HA82 394 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 MSRAQ9UJ68 235 aa10.58□□□□□ -0.72
KARS-202ENST00000319410 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
KARS-202ENST00000319410 LAD1O00515 517 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 DIAPH2O60879 1101 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 NBNO60934 754 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 PSMD10O75832 226 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SMIM10L2AP0DMW4 78 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SMIM10L2BP0DMW5 78 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 EPB41P11171 864 aaKnown RBP10.57□□□□□ -0.72
KARS-202ENST00000319410 SELPP16109 830 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SFNP31947 248 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 ZNF618Q5T7W0 954 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 B3GNT9Q6UX72 402 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 USP38Q8NB14 1042 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SREK1Q8WXA9 508 aaKnown RBP10.57□□□□□ -0.72
KARS-202ENST00000319410 TEKT3Q9BXF9 490 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 VCXQ9H320 206 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 ZNF148Q9UQR1 794 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SPO11Q9Y5K1 396 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 EMSYQ7Z589 1322 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 IGKV6D-21A0A0A0MT36 114 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.57□□□□□ -0.72
KARS-202ENST00000319410 TREHO43280 583 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 FAM107AO95990 144 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SCTRP47872 440 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SLC26A2P50443 739 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 CLCN2P51788 898 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 JAK3P52333 1124 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 TTC38Q5R3I4 469 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.57□□□□□ -0.72
KARS-202ENST00000319410 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
KARS-202ENST00000319410 UHMK1Q8TAS1 419 aaKnown RBP10.57□□□□□ -0.72
KARS-202ENST00000319410 CAGE1Q8TC20 777 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 HVCN1Q96D96 273 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
KARS-202ENST00000319410 OSBPL7Q9BZF2 842 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 RNPEPQ9H4A4 650 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 GOLPH3LQ9H4A5 285 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SLC28A3Q9HAS3 691 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SETD4Q9NVD3 440 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
KARS-202ENST00000319410 SPTBN5Q9NRC6 3674 aaKnown RBP10.56□□□□□ -0.72
KARS-202ENST00000319410 GOLGA6L10A0A0M3HER8 536 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 DLL1O00548 723 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 SLC37A4O43826 429 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 GAS7O60861 476 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 BMP15O95972 392 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 PFKMP08237 780 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 MARK3P27448 753 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 THPOP40225 353 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 ACTR2P61160 394 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 PPP2R5CQ13362 524 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 MBTPS1Q14703 1052 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 INAQ16352 499 aa10.56□□□□□ -0.72
KARS-202ENST00000319410 TRIM71Q2Q1W2 868 aaKnown RBP10.56□□□□□ -0.72
KARS-202ENST00000319410 ABHD15Q6UXT9 468 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms