RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 BZW2Q9Y6E2 419 aaKnown RBP16.99■□□□□ 0.31
CALR-201ENST00000316448 ANO9A1A5B4 782 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 HMGCRP04035 888 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 ASGR1P07306 291 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 RFX1P22670 979 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 ANXA13P27216 316 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 GDF6Q6KF10 455 aaPredicted RBP16.98■□□□□ 0.31
CALR-201ENST00000316448 DNAAF5Q86Y56 855 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 A0A1B0GUA9 196 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 MACROD2A1Z1Q3 448 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 CST3P01034 146 aaPredicted RBP16.98■□□□□ 0.31
CALR-201ENST00000316448 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
CALR-201ENST00000316448 MAGEA1P43355 309 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 SPOPLQ6IQ16 392 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 USP37Q86T82 979 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 RAET1EQ8TD07 263 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
CALR-201ENST00000316448 ATP8B3O60423 1300 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 FKTNO75072 461 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 STAG3L1P0CL83 205 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 CXCL8P10145 99 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 DARSP14868 501 aaKnown RBP16.97■□□□□ 0.31
CALR-201ENST00000316448 PAPD7Q5XG87 772 aaKnown RBP16.97■□□□□ 0.31
CALR-201ENST00000316448 RSRC2Q7L4I2 434 aaKnown RBP16.97■□□□□ 0.31
CALR-201ENST00000316448 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 TRIM58Q8NG06 486 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 GCOM2Q9BZD3 368 aaPredicted RBP16.97■□□□□ 0.31
CALR-201ENST00000316448 CXCL16Q9H2A7 254 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 SPC25Q9HBM1 224 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 APOBEC3GQ9HC16 384 aaKnown RBP16.97■□□□□ 0.31
CALR-201ENST00000316448 GTF2IRD1Q9UHL9 959 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 NENFQ9UMX5 172 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 CAPN6Q9Y6Q1 641 aa16.97■□□□□ 0.31
CALR-201ENST00000316448 MCF2P10911 925 aa16.96■□□□□ 0.31
CALR-201ENST00000316448 FERP16591 822 aa16.96■□□□□ 0.31
CALR-201ENST00000316448 BIRC3Q13489 604 aa16.96■□□□□ 0.31
CALR-201ENST00000316448 WHAMMP3Q1A5X7 153 aa16.96■□□□□ 0.31
CALR-201ENST00000316448 DHX38Q92620 1227 aaKnown RBP16.96■□□□□ 0.31
CALR-201ENST00000316448 NT5C1BQ96P26 610 aa16.96■□□□□ 0.31
CALR-201ENST00000316448 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.31
CALR-201ENST00000316448 ACP6Q9NPH0 428 aa16.96■□□□□ 0.31
CALR-201ENST00000316448 LUC7LQ9NQ29 371 aaKnown RBP16.96■□□□□ 0.31
CALR-201ENST00000316448 DDX20Q9UHI6 824 aaKnown RBP16.96■□□□□ 0.31
CALR-201ENST00000316448 LACTBL1A8MY62 500 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.38e-89■■■□□ 19.2
CALR-201ENST00000316448 ATP1A1P05023 1023 aaKnown RBP16.96■□□□□ 0.3
CALR-201ENST00000316448 SNX17Q15036 470 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 CEP112Q8N8E3 955 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 LNX1Q8TBB1 728 aaPredicted RBP16.96■□□□□ 0.3
CALR-201ENST00000316448 PXYLP1Q8TE99 480 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 UBXN4Q92575 508 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 ARID3AQ99856 593 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 MTMR12Q9C0I1 747 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 SALL4Q9UJQ4 1053 aa16.96■□□□□ 0.3
CALR-201ENST00000316448 UMODL1Q5DID0 1318 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 THSD7BQ9C0I4 1608 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 ERLIN2O94905 339 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 EIF4BP23588 611 aaKnown RBP16.95■□□□□ 0.3
CALR-201ENST00000316448 WDR49Q8IV35 697 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 FMNL3Q8IVF7 1028 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 FAM71AQ8IYT1 594 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 SLC30A5Q8TAD4 765 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 SHC3Q92529 594 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 PACSIN1Q9BY11 444 aa16.95■□□□□ 0.3
CALR-201ENST00000316448 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
CALR-201ENST00000316448 ANK1P16157 1881 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 ENC1O14682 589 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 B4GALT4O60513 344 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 TACC1O75410 805 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 CALCAP01258 141 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 INHAP05111 366 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 GNAT1P11488 350 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 CST5P28325 142 aaPredicted RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 PIK3CAP42336 1068 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 CDC42EP1Q00587 391 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 C10orf76Q5T2E6 689 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 LHX8Q68G74 356 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 CATSPER4Q7RTX7 472 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 RNF10Q8N5U6 811 aaKnown RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 SLC20A1Q8WUM9 679 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 SGPL1O95470 568 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 NPTXRO95502 500 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 TFRCP02786 760 aaKnown RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 NFICP08651 508 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 CLTAP09496 248 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 H2AFXP16104 143 aaPredicted RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 TFAMQ00059 246 aaKnown RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
CALR-201ENST00000316448 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 GOLGA1Q92805 767 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms