RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TMEM132BQ14DG7 1078 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.12
RFFL-201ENST00000315249 FAM200BP0CF97 657 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 SMARCA1P28370 1054 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 TAF6P49848 677 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 GOLGA7BQ2TAP0 167 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 SYCP2LQ5T4T6 812 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 SDCCAG3Q96C92 435 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 VPS33BQ9H267 617 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 C10orf67Q8IYJ2 551 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 KCND2Q9NZV8 630 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 GOLGA8QA0A0J9YX86 632 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 GOLGA8OA6NCC3 632 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 GOLGA8NF8WBI6 632 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 EXTL3O43909 919 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 KPNA6O60684 536 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 MYBL1P10243 752 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 PDGFRAP16234 1089 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 NCF2P19878 526 aaPredicted RBP14.27□□□□□ -0.12
RFFL-201ENST00000315249 RPA1P27694 616 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 ANTXR2P58335 489 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 KIF19Q2TAC6 998 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 ITPRIPL1Q6GPH6 555 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 LRRC4BQ9NT99 713 aa14.27□□□□□ -0.12
RFFL-201ENST00000315249 WEE1P30291 646 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 DEUP1Q05D60 604 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 DACT2Q5SW24 774 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 HLA-DRAP01903 254 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 ZFXP17010 805 aaPredicted RBP14.27□□□□□ -0.13
RFFL-201ENST00000315249 AKT1P31749 480 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 DSG3P32926 999 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 CYP2C19P33261 490 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 PTGISQ16647 500 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 GAS2L3Q86XJ1 694 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 TTC8Q8TAM2 541 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.138e-7■■□□□ 11.7
RFFL-201ENST00000315249 FAN1Q9Y2M0 1017 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 IQANK1A0A1B0GTG1 560 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 GNGT2O14610 69 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 ARL4CP56559 192 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 TAP1Q03518 808 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 LCMT1Q9UIC8 334 aa14.27□□□□□ -0.13
RFFL-201ENST00000315249 H7C4K7 107 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 HOXA2O43364 376 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 SLC37A4O43826 429 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
RFFL-201ENST00000315249 POMCP01189 267 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 ALDH2P05091 517 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 SERPIND1P05546 499 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 SERPINB6P35237 376 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 PCSK7Q16549 785 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 RHOT1Q8IXI2 618 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 DPF2Q92785 391 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 ATXN7L3BQ96GX2 97 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 AGPAT1Q99943 283 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 PXDNQ92626 1479 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 EFHBQ8N7U6 833 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 RBBP8NLQ8NC74 664 aaPredicted RBP14.26□□□□□ -0.13
RFFL-201ENST00000315249 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.26□□□□□ -0.13
RFFL-201ENST00000315249 PACSIN2Q9UNF0 486 aaPredicted RBP14.26□□□□□ -0.13
RFFL-201ENST00000315249 HADHAP40939 763 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 SP3Q02447 781 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 MOB2Q70IA6 237 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 TRIM42Q8IWZ5 723 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 VPS11Q9H270 941 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 DDX56Q9NY93 547 aaKnown RBP14.26□□□□□ -0.13
RFFL-201ENST00000315249 CKMP06732 381 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 THP07101 528 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 AKR1A1P14550 325 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 FMO5P49326 533 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
RFFL-201ENST00000315249 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 NFRKBQ6P4R8 1299 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 MCEEQ96PE7 176 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 PDE11AQ9HCR9 933 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 APEX2Q9UBZ4 518 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 CFAP69A5D8W1 941 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 STRNO43815 780 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 GHRP10912 638 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 PRAMEF19Q5SWL8 479 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 H0Y626 953 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 ATPAF2Q8N5M1 289 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 GMCL1Q96IK5 515 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 TBX20Q9UMR3 447 aa14.26□□□□□ -0.13
RFFL-201ENST00000315249 TTC4O95801 387 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 PPATQ06203 517 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 CHSY1Q86X52 802 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 KCNN4O15554 427 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 ADCY3O60266 1144 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 KLRC2P26717 231 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 ETFBP38117 255 aa14.25□□□□□ -0.13
RFFL-201ENST00000315249 BTG3Q14201 252 aaPredicted RBP14.25□□□□□ -0.13
RFFL-201ENST00000315249 RAB42Q8N4Z0 105 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms