RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 ANKRD20A12PQ8NF67 263 aa17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 PLEKHO2Q8TD55 490 aa17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 MMRN2Q9H8L6 949 aa17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 RALGAPA2Q2PPJ7 1873 aa17.03■□□□□ 0.32
TUBA3E-201ENST00000312988 TRIP11Q15643 1979 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 XPOTO43592 962 aaKnown RBP17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 DLG4P78352 724 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 GRIK3Q13003 919 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 BTG3Q14201 252 aaPredicted RBP17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 XKR4Q5GH76 650 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 SPOUT1Q5T280 376 aaKnown RBP17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 CDKAL1Q5VV42 579 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 IRF2BP1Q8IU81 584 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 WDR49Q8IV35 697 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 LRRC43Q8N309 656 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 BEST2Q8NFU1 509 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 PARD3BQ8TEW8 1205 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 RSPH1Q8WYR4 309 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 BORCS6Q96GS4 357 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 ANKRD36BP1Q96IX9 119 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 ZMAT2Q96NC0 199 aaKnown RBP17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 SLC38A7Q9NVC3 462 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 DERAQ9Y315 318 aa17.02■□□□□ 0.32
TUBA3E-201ENST00000312988 PTPRSQ13332 1948 aa17.02■□□□□ 0.31
TUBA3E-201ENST00000312988 PES1O00541 588 aaKnown RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 STX10O60499 249 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TNNC2P02585 160 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TPM2P07951 284 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 EEF1GP26641 437 aaKnown RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TCP11X2Q5H9J9 407 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 NT5DC4Q86YG4 428 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 EFCAB13Q8IY85 973 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 CMTR2Q8IYT2 770 aaKnown RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TDHQ8IZJ6 230 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 GSTCDQ8NEC7 633 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 C18orf25Q96B23 403 aaPredicted RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TSPAN18Q96SJ8 248 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 RAD9AQ99638 391 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TBC1D13Q9NVG8 400 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 UBQLN1Q9UMX0 589 aaKnown RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 INSL6Q9Y581 213 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 ANK1P16157 1881 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 INPPL1O15357 1258 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 PHACTR2O75167 634 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 PRKCSHP14314 528 aaPredicted RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 RABGGTBP53611 331 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 MARSP56192 900 aaKnown RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 BIRC3Q13489 604 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 DUOXA2Q1HG44 320 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 GAS2L3Q86XJ1 694 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TRIM59Q8IWR1 403 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 ZNF689Q96CS4 500 aaPredicted RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 PPP1R10Q96QC0 940 aaKnown RBP17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TAB2Q9NYJ8 693 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 TUBGCP4Q9UGJ1 667 aa17.01■□□□□ 0.31
TUBA3E-201ENST00000312988 PTPRJQ12913 1337 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 FNDC1Q4ZHG4 1894 aaPredicted RBP17■□□□□ 0.31
TUBA3E-201ENST00000312988 CLSTN1O94985 981 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 ZNF18P17022 549 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 GCLMP48507 274 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 GUCY2FP51841 1108 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 ENPEPQ07075 957 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 FAM109BQ6ICB4 259 aaPredicted RBP17■□□□□ 0.31
TUBA3E-201ENST00000312988 OR5B17Q8NGF7 314 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 TUBGCP2Q9BSJ2 902 aa17■□□□□ 0.31
TUBA3E-201ENST00000312988 R3HCC1Q9Y3T6 440 aaKnown RBP17■□□□□ 0.31
TUBA3E-201ENST00000312988 TDRD15B5MCY1 1934 aaKnown RBP16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 CASTOR2A6NHX0 329 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 ZC3H11AO75152 810 aaKnown RBP eCLIP16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 ATP1A3P13637 1013 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 AP3M2P53677 418 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 HTRA4P83105 476 aaPredicted RBP16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 TUSC3Q13454 348 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 MAN2A1Q16706 1144 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 ZNF280BQ86YH2 543 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 FIBCD1Q8N539 461 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 SLC35C1Q96A29 364 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 RBSNQ9H1K0 784 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 HSD3B7Q9H2F3 369 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 DPP3Q9NY33 737 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 TNRC18O15417 2968 aaPredicted RBP16.99■□□□□ 0.31
TUBA3E-201ENST00000312988 PDCD11Q14690 1871 aaKnown RBP16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms