RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 USP21Q9UK80 565 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 AIM2O14862 343 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 GH2P01242 217 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 KRT16P08779 473 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 ZNF200P98182 395 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 JAMLQ86YT9 394 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 SH3GL2Q99962 352 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 TRIM9Q9C026 710 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 C20orf96Q9NUD7 363 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 ZNF197O14709 1029 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 SLC16A3O15427 465 aaKnown RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 KCNN4O15554 427 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 AP3M2P53677 418 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 C6orf10Q5SRN2 563 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 PPP4R4Q6NUP7 873 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 TEKT4Q8WW24 435 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 NSL1Q96IY1 281 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 STK33Q9BYT3 514 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 ERVK-7P63135 1459 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 SRP72O76094 671 aaKnown RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 CCDC15Q0P6D6 951 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 CYB5D1Q6P9G0 228 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 MIGA2Q7L4E1 593 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 GIMAP8Q8ND71 665 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 ISCUQ9H1K1 167 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 NDFIP2Q9NV92 336 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 MAGEA13PA6NCF6 341 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 PRR23D1E9PI22 279 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 AP3B1O00203 1094 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 XPO1O14980 1071 aaKnown RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 PRR23D2P0DMB1 279 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 BTKQ06187 659 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 RNF219Q5W0B1 726 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 SCN4BQ8IWT1 228 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 MMGT1Q8N4V1 131 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 C2orf40Q9H1Z8 148 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
CLCN6-201ENST00000312413 TRIM10Q9UDY6 481 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L10C9JJH3 530 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 NMT2O60551 498 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 APRTP07741 180 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 NFX1Q12986 1120 aaKnown RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 NME3Q13232 169 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 PLEKHM3Q6ZWE6 761 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 RIBC1Q8N443 379 aaPredicted RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 B4GALNT2Q8NHY0 566 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 AGPAT5Q9NUQ2 364 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 TDP2O95551 362 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 ASNSP08243 561 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 CLK1P49759 484 aaKnown RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 TSPY1Q01534 308 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 STXBP2Q15833 593 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 UGP2Q16851 508 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 ZNF341Q9BYN7 854 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 OCM2P0CE71 109 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 OCMP0CE72 109 aaPredicted RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 GRIN1Q05586 938 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 SETD3Q86TU7 594 aaPredicted RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 IFNEQ86WN2 208 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 NOA1Q8NC60 698 aaKnown RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 CCSER1Q9C0I3 900 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 SPAG6O75602 509 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 VCPP55072 806 aaKnown RBP14.39□□□□□ -0.11
CLCN6-201ENST00000312413 KCNQ4P56696 695 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 PTK7Q13308 1070 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 CRYMQ14894 314 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 LXNQ9BS40 222 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 PCMTD2Q9NV79 361 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 ATP7BP35670 1465 aa14.39□□□□□ -0.11
CLCN6-201ENST00000312413 KPNB1Q14974 876 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 NAB2Q15742 525 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 WLSQ5T9L3 541 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 TAS2R42Q7RTR8 314 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 CEP95Q96GE4 821 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 CD248Q9HCU0 757 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 GIMAP4Q9NUV9 329 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 APEX2Q9UBZ4 518 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 ABCB11O95342 1321 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 HMOX2P30519 316 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 HAUS6Q7Z4H7 955 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 MRPL4Q9BYD3 311 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 RAB6BQ9NRW1 208 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 ASIC4Q96FT7 647 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 ERP44Q9BS26 406 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 COA1Q9GZY4 146 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 DCP1AQ9NPI6 582 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 FAM217BQ9NTX9 383 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 DDX5P17844 614 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms