RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TTC3P53804 2025 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 ADGRA3Q8IWK6 1321 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 ABHD14A-ACY1A0A1B0GW23 586 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 KLHL33A6NCF5 533 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 A6NCN8 305 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 LRRIQ4A6NIV6 560 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 ATP9BO43861 1147 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 PRMT3O60678 531 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 CSDE1O75534 798 aaKnown RBP8.97□□□□□ -0.97
CHD6-201ENST00000309279 FAM13AO94988 1023 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 FGBP02675 491 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
CHD6-201ENST00000309279 SFPQP23246 707 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHD6-201ENST00000309279 EFNA5P52803 228 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 SMTNP53814 917 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 NCKAP1LP55160 1127 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 MBTD1Q05BQ5 628 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 PAK2Q13177 524 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 ZNF211Q13398 564 aaPredicted RBP8.97□□□□□ -0.97
CHD6-201ENST00000309279 TCTN1Q2MV58 587 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 RGL4Q8IZJ4 473 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 TMEM161BQ8NDZ6 487 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 CNNM3Q8NE01 707 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 TTC8Q8TAM2 541 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 HERVK_113Q902F9 699 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 PRIMPOLQ96LW4 560 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 SCLT1Q96NL6 688 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 CCDC113Q9H0I3 377 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 ST6GALNAC4Q9H4F1 302 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 TMEM134Q9H6X4 195 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 RMI1Q9H9A7 625 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 OLFML3Q9NRN5 406 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 SEL1LQ9UBV2 794 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 EGFL7Q9UHF1 273 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 DAAM1Q9Y4D1 1078 aa8.97□□□□□ -0.97
CHD6-201ENST00000309279 PVALEFA0A1B0GWK0 134 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 CCDC169A6NNP5 214 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 EFCAB14O75071 495 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 TBCAO75347 108 aaKnown RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 ECEL1O95672 775 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 ACTN1P12814 892 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 GAP43P17677 238 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 HOXA11P31270 313 aaPredicted RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 AFMP43652 599 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 SARSP49591 514 aaKnown RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 EHHADHQ08426 723 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 CUL4BQ13620 913 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 IKBKEQ14164 716 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 DSC3Q14574 896 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 ZNF720Q7Z2F6 126 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 RTN4RL1Q86UN2 441 aaPredicted RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 ZBTB8OSQ8IWT0 167 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 MYCT1Q8N699 235 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 ANKRD42Q8N9B4 389 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 SLC17A8Q8NDX2 589 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 DEPTORQ8TB45 409 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 TRMT2BQ96GJ1 504 aaKnown RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 KIFC3Q9BVG8 833 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 STRA6Q9BX79 667 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 TRIM6Q9C030 488 aaPredicted RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 ABCG4Q9H172 646 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 RNF19AQ9NV58 838 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 PANK4Q9NVE7 773 aa8.96□□□□□ -0.98
CHD6-201ENST00000309279 PRMT7Q9NVM4 692 aaPredicted RBP8.96□□□□□ -0.98
CHD6-201ENST00000309279 PHLPP2Q6ZVD8 1323 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.95□□□□□ -0.98
CHD6-201ENST00000309279 H0YCG3 227 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 BOLA2-SMG1P6H3BVE0 249 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 RBAK-RBAKDNI3L0D1 243 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 K7ERI5 159 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 ACKR2O00590 384 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 MAP3K7O43318 606 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 KLRC4O43908 158 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 KIF20AO95235 890 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 IDEP14735 1019 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 EPB42P16452 691 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 CASP1P29466 404 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 AXLP30530 894 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 SNX16P57768 344 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 GTF2BQ00403 316 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 SHHQ15465 462 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 FXNQ16595 210 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 MAPK6Q16659 721 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 HERC4Q5GLZ8 1057 aaPredicted RBP8.95□□□□□ -0.98
CHD6-201ENST00000309279 C9orf50Q5SZB4 431 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 ZNF449Q6P9G9 518 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 UNC13DQ70J99 1090 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 OTOP2Q7RTS6 562 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 CATSPER4Q7RTX7 472 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 DAAM2Q86T65 1068 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 FAM178BQ8IXR5 827 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 CCDC65Q8IXS2 484 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 GRAMD1CQ8IYS0 662 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 SH3KBP1Q96B97 665 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 SRPK1Q96SB4 655 aaKnown RBP8.95□□□□□ -0.98
CHD6-201ENST00000309279 PHOX2BQ99453 314 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms