RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CDK11BP21127 795 aaKnown RBP29.41■■■□□ 2.3
HDAC3-201ENST00000305264 MCCD1P59942 119 aaPredicted RBP29.41■■■□□ 2.3
HDAC3-201ENST00000305264 TMEM130Q8N3G9 435 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 KIF12Q96FN5 646 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 TUBGCP2Q9BSJ2 902 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 RNF216Q9NWF9 866 aaPredicted RBP29.41■■■□□ 2.3
HDAC3-201ENST00000305264 TAB2Q9NYJ8 693 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 INPPL1O15357 1258 aa29.4■■■□□ 2.3
HDAC3-201ENST00000305264 KCNE1P15382 129 aa29.4■■■□□ 2.3
HDAC3-201ENST00000305264 SHHQ15465 462 aa29.4■■■□□ 2.3
HDAC3-201ENST00000305264 SURF1Q15526 300 aa29.4■■■□□ 2.3
HDAC3-201ENST00000305264 OR5B17Q8NGF7 314 aa29.4■■■□□ 2.3
HDAC3-201ENST00000305264 UBE2OQ9C0C9 1292 aaKnown RBP29.4■■■□□ 2.3
HDAC3-201ENST00000305264 SLC4A7Q9Y6M7 1214 aa29.4■■■□□ 2.3
HDAC3-201ENST00000305264 POMCP01189 267 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 TNNI1P19237 187 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 CLDN10P78369 228 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 TMEM132DQ14C87 1099 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 APTXQ7Z2E3 356 aaKnown RBP29.39■■■□□ 2.3
HDAC3-201ENST00000305264 WDR49Q8IV35 697 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 ABI1Q8IZP0 508 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 CASD1Q96PB1 797 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 MTIF3Q9H2K0 278 aaKnown RBP29.39■■■□□ 2.3
HDAC3-201ENST00000305264 MMRN2Q9H8L6 949 aa29.39■■■□□ 2.3
HDAC3-201ENST00000305264 LIMA1Q9UHB6 759 aaKnown RBP29.39■■■□□ 2.3
HDAC3-201ENST00000305264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.39■■■□□ 2.3
HDAC3-201ENST00000305264 HOXA2O43364 376 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 DGKIO75912 1065 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 PRKCSHP14314 528 aaPredicted RBP29.39■■■□□ 2.29
HDAC3-201ENST00000305264 TFAMQ00059 246 aaKnown RBP29.39■■■□□ 2.29
HDAC3-201ENST00000305264 ENPEPQ07075 957 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 PPP3CAQ08209 521 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 USP37Q86T82 979 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 ZNF516Q92618 1163 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 C18orf25Q96B23 403 aaPredicted RBP29.39■■■□□ 2.29
HDAC3-201ENST00000305264 PPP1R10Q96QC0 940 aaKnown RBP29.39■■■□□ 2.29
HDAC3-201ENST00000305264 MTMR12Q9C0I1 747 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 C2CD2Q9Y426 696 aa29.39■■■□□ 2.29
HDAC3-201ENST00000305264 NOMO2Q5JPE7 1267 aa29.38■■■□□ 2.29
HDAC3-201ENST00000305264 RNPC3Q96LT9 517 aaKnown RBP29.38■■■□□ 2.29
HDAC3-201ENST00000305264 RC3H2Q9HBD1 1191 aaKnown RBP29.38■■■□□ 2.29
HDAC3-201ENST00000305264 INTS13Q9NVM9 706 aa29.38■■■□□ 2.29
HDAC3-201ENST00000305264 TUBGCP4Q9UGJ1 667 aa29.38■■■□□ 2.29
HDAC3-201ENST00000305264 MLLT1Q03111 559 aaPredicted RBP29.37■■■□□ 2.29
HDAC3-201ENST00000305264 MAN2A1Q16706 1144 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 MIIPQ5JXC2 388 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 TMEM117Q9H0C3 514 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 DERAQ9Y315 318 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 TBKBP1A7MCY6 615 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 GCLMP48507 274 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 GUCY2FP51841 1108 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 NAB2Q15742 525 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 ZBTB6Q15916 424 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 SLC9A7Q96T83 725 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 TBC1D13Q9NVG8 400 aa29.37■■■□□ 2.29
HDAC3-201ENST00000305264 LAMA3Q16787 3333 aa29.36■■■□□ 2.29
HDAC3-201ENST00000305264 THP07101 528 aa29.36■■■□□ 2.29
HDAC3-201ENST00000305264 ATP2A2P16615 1042 aaKnown RBP29.36■■■□□ 2.29
HDAC3-201ENST00000305264 SOX4Q06945 474 aaPredicted RBP29.36■■■□□ 2.29
HDAC3-201ENST00000305264 KCNH2Q12809 1159 aa29.36■■■□□ 2.29
HDAC3-201ENST00000305264 PAN2Q504Q3 1202 aaKnown RBP29.36■■■□□ 2.29
HDAC3-201ENST00000305264 ANKRD20A12PQ8NF67 263 aa29.36■■■□□ 2.29
HDAC3-201ENST00000305264 URGCPQ8TCY9 931 aa29.36■■■□□ 2.29
HDAC3-201ENST00000305264 VPS16Q9H269 839 aa29.36■■■□□ 2.29
HDAC3-201ENST00000305264 GJB5O95377 273 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 TMEM191BP0C7N4 346 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 COPB1P53618 953 aaKnown RBP29.35■■■□□ 2.29
HDAC3-201ENST00000305264 GRIK3Q13003 919 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 CBWD6Q4V339 395 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 CBWD3Q5JTY5 395 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 CBWD5Q5RIA9 395 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 ZNF689Q96CS4 500 aaPredicted RBP29.35■■■□□ 2.29
HDAC3-201ENST00000305264 GOLGA2P5Q9HBQ8 144 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 HCSTQ9UBK5 93 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 B4GALT3O60512 393 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 SCARA3Q6AZY7 606 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 NT5DC4Q86YG4 428 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 HERC6Q8IVU3 1022 aa29.35■■■□□ 2.29
HDAC3-201ENST00000305264 AFPP02771 609 aaKnown RBP29.34■■■□□ 2.29
HDAC3-201ENST00000305264 DUOXA2Q1HG44 320 aa29.34■■■□□ 2.29
HDAC3-201ENST00000305264 VWA3BQ502W6 1294 aa29.34■■■□□ 2.29
HDAC3-201ENST00000305264 TDRD10Q5VZ19 366 aaKnown RBP29.34■■■□□ 2.29
HDAC3-201ENST00000305264 ANKRD36BP1Q96IX9 119 aa29.34■■■□□ 2.29
HDAC3-201ENST00000305264 CACNG4Q9UBN1 327 aa29.34■■■□□ 2.29
HDAC3-201ENST00000305264 UBQLN1Q9UMX0 589 aaKnown RBP29.34■■■□□ 2.29
HDAC3-201ENST00000305264 LRRC10BA6NIK2 292 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 FMO5P49326 533 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 FANCCQ00597 558 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 SV2AQ7L0J3 742 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 PHOSPHO2Q8TCD6 241 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 TSPAN18Q96SJ8 248 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 NDST4Q9H3R1 872 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 PES1O00541 588 aaKnown RBP29.33■■■□□ 2.29
HDAC3-201ENST00000305264 MXI1P50539 228 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 C15orf39Q6ZRI6 1047 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 ZNF280BQ86YH2 543 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 C1orf127Q8N9H9 656 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 YME1L1Q96TA2 773 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 TMEM8AQ9HCN3 771 aa29.33■■■□□ 2.29
HDAC3-201ENST00000305264 STX10O60499 249 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms