RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 C15orf39Q6ZRI6 1047 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 FOXD4L4Q8WXT5 416 aaPredicted RBP28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 PIK3R5Q8WYR1 880 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 ZMAT2Q96NC0 199 aaKnown RBP28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 FIZ1Q96SL8 496 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 ST6GALNAC4Q9H4F1 302 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 PLEKHA5Q9HAU0 1116 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 GOLGA2P5Q9HBQ8 144 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 SEL1LQ9UBV2 794 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 MUTYHQ9UIF7 546 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 CDH22Q9UJ99 828 aa28.87■■■□□ 2.21
CDKN2A-201ENST00000304494 MYH15Q9Y2K3 1946 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 F13A1P00488 732 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 CLTAP09496 248 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 SLC10A6Q3KNW5 377 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 SEZ6Q53EL9 994 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 KANK3Q6NY19 840 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 GPR149Q86SP6 731 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 MAP4K3Q8IVH8 894 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 CMASQ8NFW8 434 aaPredicted RBP28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 PLEKHA4Q9H4M7 779 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 TSHZ2Q9NRE2 1034 aa28.86■■■□□ 2.21
CDKN2A-201ENST00000304494 WEE2P0C1S8 567 aa28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 NMT1P30419 496 aaKnown RBP28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 RPL9P32969 192 aaKnown RBP28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 SOX4Q06945 474 aaPredicted RBP28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 PSMD5Q16401 504 aa28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 PRSS55Q6UWB4 352 aaPredicted RBP28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 CYP26C1Q6V0L0 522 aa28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 PALB2Q86YC2 1186 aa28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 HAPLN2Q9GZV7 340 aa28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.85■■■□□ 2.21
CDKN2A-201ENST00000304494 MYMKA6NI61 221 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 PODXLO00592 558 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 TGM5O43548 720 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 GAP43P17677 238 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 RPL17P18621 184 aaKnown RBP28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 ATL3Q6DD88 541 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 SFR1Q86XK3 245 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 GLYCTKQ8IVS8 523 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 SPRYD3Q8NCJ5 442 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 LNX1Q8TBB1 728 aaPredicted RBP28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 LRFN3Q9BTN0 628 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 PANK2Q9BZ23 570 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 C11orf16Q9NQ32 467 aa28.84■■■□□ 2.21
CDKN2A-201ENST00000304494 FAM86C2PA6NEL3 165 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 OGTO15294 1046 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 MEFVO15553 781 aaPredicted RBP28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 CUTAO60888 179 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 CXCL8P10145 99 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 FGFR3P22607 806 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 ZNF720Q7Z2F6 126 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 HVCN1Q96D96 273 aa28.83■■■□□ 2.21
CDKN2A-201ENST00000304494 A0A087X0B3 334 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 A0A0B4J269 797 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 CCDC195A0A1B0GUA6 201 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 SP100P23497 879 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 ZC2HC1CQ53FD0 456 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 LILRA6Q6PI73 481 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 PDILTQ8N807 584 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 C3orf58Q8NDZ4 430 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 KCNG4Q8TDN1 519 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 C18orf25Q96B23 403 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 DNAJC19Q96DA6 116 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 MSTO1Q9BUK6 570 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 RHOBTB2Q9BYZ6 727 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 MRPL44Q9H9J2 332 aaKnown RBP28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 USTQ9Y2C2 406 aa28.82■■■□□ 2.2
CDKN2A-201ENST00000304494 CITO14578 2027 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 PLXNA3P51805 1871 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 TTC26A0AVF1 554 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 PRR33A8MZF0 331 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 SPATA31D3P0C874 917 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 PPP2R3AQ06190 1150 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 SLFN12LQ6IEE8 588 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 CD300LGQ6UXG3 332 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 SPATA31D4Q6ZUB0 917 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 TDRD5Q8NAT2 981 aaKnown RBP28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 TSPAN18Q96SJ8 248 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 CLSTN3Q9BQT9 956 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 LRRC27Q9C0I9 530 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 CUEDC2Q9H467 287 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 ZDHHC7Q9NXF8 308 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 CFAP45Q9UL16 551 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 TRIP11Q15643 1979 aa28.81■■■□□ 2.2
CDKN2A-201ENST00000304494 FAM189A1O60320 539 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 COL9A1P20849 921 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 TNFSF9P41273 254 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 FOXD4L6Q3SYB3 417 aaPredicted RBP28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 FOXD4L3Q6VB84 417 aaPredicted RBP28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 CCDC149Q6ZUS6 474 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 ANKS3Q6ZW76 656 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 KREMEN2Q8NCW0 462 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 EDAQ92838 391 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 RPF1Q9H9Y2 349 aaKnown RBP28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 NUB1Q9Y5A7 615 aa28.8■■■□□ 2.2
CDKN2A-201ENST00000304494 C2CD4DB7Z1M9 353 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 XPOTO43592 962 aaKnown RBP28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 IDEP14735 1019 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 IGFBP6P24592 240 aaPredicted RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms