RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 APOL5Q9BWW9 433 aa17.53■□□□□ 0.4
SRGAP2C-201ENST00000304465 MRPL4Q9BYD3 311 aaKnown RBP17.53■□□□□ 0.4
SRGAP2C-201ENST00000304465 LRRC27Q9C0I9 530 aa17.53■□□□□ 0.4
SRGAP2C-201ENST00000304465 EPHX3Q9H6B9 360 aa17.53■□□□□ 0.4
SRGAP2C-201ENST00000304465 TMEM134Q9H6X4 195 aa17.53■□□□□ 0.4
SRGAP2C-201ENST00000304465 GDAQ9Y2T3 454 aa17.53■□□□□ 0.4
SRGAP2C-201ENST00000304465 SFI1A8K8P3 1242 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 C2CD2LO14523 706 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 RECQL4O94761 1208 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 THP07101 528 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 PTPN14Q15678 1187 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 UVSSAQ2YD98 709 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 EEF1DP3Q658K8 133 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 DAW1Q8N136 415 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 TCHPQ9BT92 498 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 PHF7Q9BWX1 381 aaPredicted RBP17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 DZANK1Q9NVP4 752 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 RMND1Q9NWS8 449 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.4
SRGAP2C-201ENST00000304465 C19orf67A6NJJ6 358 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 PI4K2BG5E9Z4 385 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 SLC16A4O15374 487 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 TADA2AO75478 443 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 PLS3P13797 630 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 GLUD2P49448 558 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 YARSP54577 528 aaKnown RBP17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 ITIH3Q06033 890 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 MAPK7Q13164 816 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 TUSC3Q13454 348 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 CBX2Q14781 532 aaPredicted RBP17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 GSTCDQ8NEC7 633 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 HPS3Q969F9 1004 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 HERC2P3Q9BVR0 1158 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 VN1R3Q9BXE9 311 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 HSD3B7Q9H2F3 369 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 MARCH5Q9NX47 278 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 LARSQ9P2J5 1176 aaKnown RBP17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 ARHGAP28Q9P2N2 729 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 BDP1A6H8Y1 2624 aa17.51■□□□□ 0.39
SRGAP2C-201ENST00000304465 H0YCG3 227 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 AP5Z1O43299 807 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 DCXO43602 365 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 EDN1P05305 212 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 KRT18P05783 430 aaKnown RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 STK4Q13043 487 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 ZNF568Q3ZCX4 644 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 TMEM31Q5JXX7 168 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 SYCE2Q6PIF2 218 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 ELMSAN1Q6PJG2 1045 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 AOPEPQ8N6M6 819 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 SPIRE2Q8WWL2 714 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 KHSRPQ92945 711 aaKnown RBP eCLIP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 ACO2Q99798 780 aaKnown RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 S1PR5Q9H228 398 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 TOPORSQ9NS56 1045 aaPredicted RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 ADAM28Q9UKQ2 775 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 ADH1AP07327 375 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 HSP90AA2PQ14568 343 aaPredicted RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 COBLL1Q53SF7 1204 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 CT47A1Q5JQC4 288 aaPredicted RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 FUT10Q6P4F1 479 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 ADSSL1Q8N142 457 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 KIAA0895Q8NCT3 520 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 SUSD6Q92537 303 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 RIPOR3Q96MK2 946 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 KLHL5Q96PQ7 755 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 REEP2Q9BRK0 252 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 NTPCRQ9BSD7 190 aaKnown RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 TARS2Q9BW92 718 aaKnown RBP17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
SRGAP2C-201ENST00000304465 MYH11P35749 1972 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 MUC3AQ02505 3323 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 CASTOR2A6NHX0 329 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 IKBKBO14920 756 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 CNPP09543 421 aaKnown RBP17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 EPCAMP16422 314 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 ERCC5P28715 1186 aaPredicted RBP17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 PRCPP42785 496 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 USP41Q3LFD5 358 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 RARS2Q5T160 578 aaKnown RBP17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 RABGGTAQ92696 567 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 ADAM7Q9H2U9 754 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 EXOC1Q9NV70 894 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 PANK4Q9NVE7 773 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 ODF2LQ9ULJ1 636 aa17.49■□□□□ 0.39
SRGAP2C-201ENST00000304465 SF3B1O75533 1304 aaKnown RBP eCLIP17.48■□□□□ 0.394e-7■■■■■ 133.7
SRGAP2C-201ENST00000304465 F8W810 466 aa17.48■□□□□ 0.39
SRGAP2C-201ENST00000304465 PTGESO14684 152 aa17.48■□□□□ 0.39
SRGAP2C-201ENST00000304465 FAM13AO94988 1023 aa17.48■□□□□ 0.39
SRGAP2C-201ENST00000304465 IDEP14735 1019 aa17.48■□□□□ 0.39
SRGAP2C-201ENST00000304465 GRM5P41594 1212 aa17.48■□□□□ 0.39
SRGAP2C-201ENST00000304465 MTHFRP42898 656 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms