RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ZFP37Q9Y6Q3 630 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 POU2F2P09086 479 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 SPATA31D3P0C874 917 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 KCNE1P15382 129 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 RPL17P18621 184 aaKnown RBP18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 FGFR3P22607 806 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 ABCD1P33897 745 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 LONP1P36776 959 aaKnown RBP18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 CLCNKBP51801 687 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 SPATA31D4Q6ZUB0 917 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 ANKS3Q6ZW76 656 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 TMEM161BQ8NDZ6 487 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 SNX27Q96L92 541 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 CXCL16Q9H2A7 254 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 DUSP12Q9UNI6 340 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 DOCK8Q8NF50 2099 aa18.25■□□□□ 0.51
TRAPPC1-201ENST00000303731 MAPTP10636 758 aaKnown RBP18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 RPL9P32969 192 aaKnown RBP18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 RAB33AQ14088 237 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 NOLC1Q14978 699 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 CEP120Q8N960 986 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 PRSS33Q8NF86 280 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 FEZF2Q8TBJ5 459 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 MFSD1Q9H3U5 465 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 CNTN3Q9P232 1028 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 MTRRQ9UBK8 725 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 BACE2Q9Y5Z0 518 aa18.24■□□□□ 0.51
TRAPPC1-201ENST00000303731 SFI1A8K8P3 1242 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 ABLIM1O14639 778 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 CLDN3O15551 220 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 XYLBO75191 536 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 VCPP55072 806 aaKnown RBP18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 OSTNP61366 133 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 RAD51AP2Q09MP3 1159 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 KYAT1Q16773 422 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 PPM1LQ5SGD2 360 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 IER5LQ5T953 404 aa18.23■□□□□ 0.51
TRAPPC1-201ENST00000303731 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 SYN3O14994 580 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 N4BP1O75113 896 aaKnown RBP18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 C8AP07357 584 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 CLCN5P51795 746 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 NCKAP1LP55160 1127 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 MCL1Q07820 350 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 CUL4AQ13619 759 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 RASSF8Q8NHQ8 419 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 PLIN2Q99541 437 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 PLEKHA5Q9HAU0 1116 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 ANKFY1Q9P2R3 1169 aa18.22■□□□□ 0.51
TRAPPC1-201ENST00000303731 PODXLO00592 558 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 PDGFBP01127 241 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 MYBP10242 640 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 OR1D2P34982 312 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 ASTLQ6HA08 431 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 GET4Q7L5D6 327 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 ALYREFQ86V81 257 aaKnown RBP18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 BICD1Q96G01 975 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 MYADMQ96S97 322 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 PARVGQ9HBI0 331 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 GOLGA2P5Q9HBQ8 144 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 FBXL21Q9UKT6 434 aa18.21■□□□□ 0.51
TRAPPC1-201ENST00000303731 LAMP2P13473 410 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 FSHRP23945 695 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 MRE11P49959 708 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 ZNF131P52739 623 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 SOX4Q06945 474 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 TCF15Q12870 199 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 SF3A1Q15459 793 aaKnown RBP18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 ARSHQ5FYA8 562 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 AXDND1Q5T1B0 1012 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 SLC8B1Q6J4K2 584 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 CD300LGQ6UXG3 332 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 HAUS6Q7Z4H7 955 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 GPBP1Q86WP2 473 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 ZMAT2Q96NC0 199 aaKnown RBP18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 TSPAN18Q96SJ8 248 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 REEP2Q9BRK0 252 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 WNT16Q9UBV4 365 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 CDY1Q9Y6F8 540 aa18.2■□□□□ 0.5
TRAPPC1-201ENST00000303731 VPS37CA5D8V6 355 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 H7C4K7 107 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 GALR2O43603 387 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 FAM13AO94988 1023 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 KRT18P05783 430 aaKnown RBP18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 CLTAP09496 248 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 SRFP11831 508 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 HARSP12081 509 aaKnown RBP18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 MATR3P43243 847 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 LIG4P49917 911 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 SLC7A14Q8TBB6 771 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 RAD54LQ92698 747 aa18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 ZBTB45Q96K62 511 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC1-201ENST00000303731 CCSER1Q9C0I3 900 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms