RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 DUSP9Q99956 384 aaKnown RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 DNAJB4Q9UDY4 337 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 DERAQ9Y315 318 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 PDCD11Q14690 1871 aaKnown RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 XPOTO43592 962 aaKnown RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 ALDH7A1P49419 539 aaKnown RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 DSC1Q08554 894 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 NAB2Q15742 525 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 ZSCAN23Q3MJ62 389 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 ZC3H3Q8IXZ2 948 aaKnown RBP26.55■■□□□ 1.84
HOXC9-201ENST00000303450 COLGALT2Q8IYK4 626 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 FAM186BQ8IYM0 893 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 FNBP1Q96RU3 617 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 MTUS1Q9ULD2 1270 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 C2CD2Q9Y426 696 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 PCDHB12Q9Y5F1 795 aa26.55■■□□□ 1.84
HOXC9-201ENST00000303450 MAPK13O15264 365 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 B4GALT3O60512 393 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 NFICP08651 508 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 LINC00271P0C7V0 271 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 EPB41P11171 864 aaKnown RBP26.54■■□□□ 1.84
HOXC9-201ENST00000303450 CTNNB1P35222 781 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 WNT7BP56706 349 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 BCAR1P56945 870 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 PSMD6Q15008 389 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 NT5DC4Q86YG4 428 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 COLGALT1Q8NBJ5 622 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 C18orf25Q96B23 403 aaPredicted RBP26.54■■□□□ 1.84
HOXC9-201ENST00000303450 CCDC127Q96BQ5 260 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 CEP63Q96MT8 703 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 ZNF558Q96NG5 402 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 SAMD11Q96NU1 681 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 TMEM175Q9BSA9 504 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 C17orf80Q9BSJ5 609 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 MKNK1Q9BUB5 465 aa26.54■■□□□ 1.84
HOXC9-201ENST00000303450 UBQLN1Q9UMX0 589 aaKnown RBP26.54■■□□□ 1.84
HOXC9-201ENST00000303450 NLRC5Q86WI3 1866 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 KIAA1671Q9BY89 1806 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 ALDH2P05091 517 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 DLATP10515 647 aaKnown RBP26.53■■□□□ 1.84
HOXC9-201ENST00000303450 BMPR1AP36894 532 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 OR1G1P47890 313 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 ERVK-21P61565 698 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 TPD52L1Q16890 204 aaPredicted RBP26.53■■□□□ 1.84
HOXC9-201ENST00000303450 KCNT2Q6UVM3 1135 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 SPRED2Q7Z698 418 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 LRCH3Q96II8 777 aa26.53■■□□□ 1.84
HOXC9-201ENST00000303450 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.53■■□□□ 1.84
HOXC9-201ENST00000303450 CARNS1A5YM72 827 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 CASTOR2A6NHX0 329 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 FGFR1OPO95684 399 aaKnown RBP26.52■■□□□ 1.84
HOXC9-201ENST00000303450 GALTP07902 379 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 PBX3P40426 434 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 TFAMQ00059 246 aaKnown RBP26.52■■□□□ 1.84
HOXC9-201ENST00000303450 ZBTB6Q15916 424 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 C11orf57Q6ZUT1 292 aaPredicted RBP26.52■■□□□ 1.84
HOXC9-201ENST00000303450 INTS8Q75QN2 995 aaKnown RBP26.52■■□□□ 1.84
HOXC9-201ENST00000303450 EFCAB13Q8IY85 973 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 BEST2Q8NFU1 509 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 CACTINQ8WUQ7 758 aaKnown RBP26.52■■□□□ 1.84
HOXC9-201ENST00000303450 MED15Q96RN5 788 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 SRRTQ9BXP5 876 aaKnown RBP26.52■■□□□ 1.84
HOXC9-201ENST00000303450 DNAJC25Q9H1X3 360 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 CERS4Q9HA82 394 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 GOLGA2P5Q9HBQ8 144 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 FAN1Q9Y2M0 1017 aa26.52■■□□□ 1.84
HOXC9-201ENST00000303450 SLC16A3O15427 465 aaKnown RBP26.51■■□□□ 1.83
HOXC9-201ENST00000303450 KRT13P13646 458 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 TNNI1P19237 187 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 SLC11A1P49279 550 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 SOX4Q06945 474 aaPredicted RBP26.51■■□□□ 1.83
HOXC9-201ENST00000303450 EPC2Q52LR7 807 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 FILIP1Q7Z7B0 1213 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 USP37Q86T82 979 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 ZNF576Q9H609 170 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 TUBGCP4Q9UGJ1 667 aa26.51■■□□□ 1.83
HOXC9-201ENST00000303450 NT5C1B-RDH14C9J2C7 533 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 NRP1O14786 923 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 CYP3A5P20815 502 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 SPATA1Q5VX52 437 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 PARD3BQ8TEW8 1205 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 UROC1Q96N76 676 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 PLVAPQ9BX97 442 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 NAT10Q9H0A0 1025 aaKnown RBP26.5■■□□□ 1.83
HOXC9-201ENST00000303450 CACNG4Q9UBN1 327 aa26.5■■□□□ 1.83
HOXC9-201ENST00000303450 PRG3Q9Y2Y8 225 aaPredicted RBP26.5■■□□□ 1.83
HOXC9-201ENST00000303450 TMEM265A0A087WTH1 108 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 TMEM191BP0C7N4 346 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 PPM1AP35813 382 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 ANO6Q4KMQ2 910 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 LMBRD2Q68DH5 695 aaPredicted RBP26.49■■□□□ 1.83
HOXC9-201ENST00000303450 WDR49Q8IV35 697 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 TMC2Q8TDI7 906 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 ARNTL2Q8WYA1 636 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 RABGGTAQ92696 567 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 DDX27Q96GQ7 796 aaKnown RBP26.49■■□□□ 1.83
HOXC9-201ENST00000303450 ANKRD36BP1Q96IX9 119 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 POP1Q99575 1024 aaKnown RBP26.49■■□□□ 1.83
HOXC9-201ENST00000303450 CGRRF1Q99675 332 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 FUCA2Q9BTY2 467 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms