RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 ARHGEF6Q15052 776 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 STRIP1Q5VSL9 837 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 SLC26A7Q8TE54 656 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 C9orf72Q96LT7 481 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 ADAM33Q9BZ11 813 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 RBBP8NLQ8NC74 664 aaPredicted RBP22.22■■□□□ 1.15
LETM1-201ENST00000302787 PDCD6IPQ8WUM4 868 aaKnown RBP22.22■■□□□ 1.15
LETM1-201ENST00000302787 ANKS1AQ92625 1134 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 ACAP3Q96P50 834 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 MAD2L2Q9UI95 211 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 USP15Q9Y4E8 981 aaPredicted RBP22.22■■□□□ 1.15
LETM1-201ENST00000302787 LSP1P33241 339 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 HMGCS2P54868 508 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 SLC8A2Q9UPR5 921 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 NEU2Q9Y3R4 380 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 PPP1R12AO14974 1030 aaPredicted RBP22.21■■□□□ 1.15
LETM1-201ENST00000302787 CSPG5O95196 566 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 ANGPTL8Q6UXH0 198 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 ANO5Q75V66 913 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 AFF2P51816 1311 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 ZFATQ9P243 1243 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 EIF4E1BA6NMX2 242 aaKnown RBP22.21■■□□□ 1.15
LETM1-201ENST00000302787 PIK3R2O00459 728 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 E2F6O75461 281 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 RPA1P27694 616 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 NCOA4Q13772 614 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 SYCP2LQ5T4T6 812 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 MCEEQ96PE7 176 aa22.21■■□□□ 1.15
LETM1-201ENST00000302787 CELF4Q9BZC1 486 aaKnown RBP22.21■■□□□ 1.15
LETM1-201ENST00000302787 DDX42Q86XP3 938 aaKnown RBP eCLIP22.2■■□□□ 1.15
LETM1-201ENST00000302787 CEP70Q8NHQ1 597 aa22.2■■□□□ 1.15
LETM1-201ENST00000302787 HNRNPLLQ8WVV9 542 aaKnown RBP22.2■■□□□ 1.15
LETM1-201ENST00000302787 SEC16BQ96JE7 1060 aa22.2■■□□□ 1.15
LETM1-201ENST00000302787 PSD3Q9NYI0 1048 aa22.2■■□□□ 1.15
LETM1-201ENST00000302787 PGM1P36871 562 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 CUL3Q13618 768 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 FASTKD1Q53R41 847 aaKnown RBP22.2■■□□□ 1.14
LETM1-201ENST00000302787 PRR5LQ6MZQ0 368 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 ZNF560Q96MR9 790 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 GCNAQ96QF7 691 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 ERVK-24P63145 666 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 DAGLBQ8NCG7 672 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 ATXN7L3BQ96GX2 97 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 MKNK1Q9BUB5 465 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 WDR35Q9P2L0 1181 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 ICA1LQ8NDH6 482 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 PSMC3IPQ9P2W1 217 aaPredicted RBP22.2■■□□□ 1.14
LETM1-201ENST00000302787 BAATQ14032 418 aaPredicted RBP22.2■■□□□ 1.14
LETM1-201ENST00000302787 FBXW10Q5XX13 1052 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 HHIPL2Q6UWX4 724 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 SP110Q9HB58 689 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 ALG6Q9Y672 507 aa22.2■■□□□ 1.14
LETM1-201ENST00000302787 ATP9BO43861 1147 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 MOCS2O96007 188 aaPredicted RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 CD44P16070 742 aaKnown RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 ALDH18A1P54886 795 aaKnown RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 C4orf33Q8N1A6 199 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 OTUD5Q96G74 571 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 HNRNPCL1O60812 293 aaKnown RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 SESN2P58004 480 aaPredicted RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 ACTR2P61160 394 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 PRAMEP78395 509 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 RNF135Q8IUD6 432 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 AGR3Q8TD06 166 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 SIK2Q9H0K1 926 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 ING2Q9H160 280 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 L2HGDHQ9H9P8 463 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 KDM6AO15550 1401 aaPredicted RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 RNF103-CHMP3A0A140T963 221 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 ATMINO43313 823 aaPredicted RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 TROAPQ12815 778 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 PGBD4Q96DM1 585 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 ERP44Q9BS26 406 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 ARHGDIAP52565 204 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 PIGHQ14442 188 aaPredicted RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 SGSM3Q96HU1 749 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 TSSK1BQ9BXA7 367 aa22.19■■□□□ 1.14
LETM1-201ENST00000302787 XPO7Q9UIA9 1087 aaKnown RBP22.19■■□□□ 1.14
LETM1-201ENST00000302787 IRAK1P51617 712 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 NPHS2Q9NP85 383 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 AGAP1Q9UPQ3 857 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 FAM47DPA6NHR8 397 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 ENTPD3O75355 529 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 FOXD4Q12950 439 aaPredicted RBP22.18■■□□□ 1.14
LETM1-201ENST00000302787 GOLPH3Q9H4A6 298 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 SARS2Q9NP81 518 aaKnown RBP22.18■■□□□ 1.14
LETM1-201ENST00000302787 UBE2Q2LH0YL09 131 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 PDGFRAP16234 1089 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 HIC1Q14526 733 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 KCNV1Q6PIU1 500 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 RBM43Q6ZSC3 357 aaKnown RBP22.18■■□□□ 1.14
LETM1-201ENST00000302787 OR6P1Q8NGX9 317 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 DNAJC7Q99615 494 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 ENO1P06733 434 aaKnown RBP22.18■■□□□ 1.14
LETM1-201ENST00000302787 PLEKP08567 350 aaPredicted RBP22.18■■□□□ 1.14
LETM1-201ENST00000302787 HADHAP40939 763 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 IMPG1Q17R60 797 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 SGSM1Q2NKQ1 1148 aa22.18■■□□□ 1.14
LETM1-201ENST00000302787 PLA2G4FQ68DD2 849 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms