RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ATP6V0A1Q93050 837 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 TRAF3IP3Q9Y228 551 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
SDC2-201ENST00000302190 RALAP11233 206 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 PPATQ06203 517 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 PPP3CAQ08209 521 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 HSPH1Q92598 858 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 TATDN2Q93075 761 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 NLRP4Q96MN2 994 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 GLIS2Q9BZE0 524 aaPredicted RBP14.95□□□□□ -0.02
SDC2-201ENST00000302190 TUFT1Q9NNX1 390 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 IRAK4Q9NWZ3 460 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 SEL1LQ9UBV2 794 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 TTLL3Q9Y4R7 772 aa14.95□□□□□ -0.02
SDC2-201ENST00000302190 BAG2O95816 211 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 ASNSP08243 561 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 DNAJC3Q13217 504 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 DHX34Q14147 1143 aaKnown RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 SLC13A5Q86YT5 568 aaPredicted RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 RFX6Q8HWS3 928 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 MAIP1Q8WWC4 291 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 SLC5A5Q92911 643 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 TTC17Q96AE7 1141 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 TAAR1Q96RJ0 339 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 SGIP1Q9BQI5 828 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 L3MBTL1Q9Y468 752 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 IGSF9BQ9UPX0 1349 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 STAM2O75886 525 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 RRM1P23921 792 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 C15orf52Q6ZUT6 534 aaKnown RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 ZSWIM1Q9BR11 485 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 DOCK2Q92608 1830 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 TBX3O15119 743 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 TGFB1I1O43294 461 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 COILP38432 576 aaPredicted RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 ITGB3BPQ13352 177 aaPredicted RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 P3H1Q32P28 736 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 OTOP1Q7RTM1 612 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 ZKSCAN4Q969J2 545 aaPredicted RBP14.94□□□□□ -0.02
SDC2-201ENST00000302190 RNF146Q9NTX7 359 aa14.94□□□□□ -0.02
SDC2-201ENST00000302190 WDR64B1ANS9 1081 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 PDHA1P08559 390 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 GNA15P30679 374 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 SCTRP47872 440 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 ORC1Q13415 861 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 SNRNP48Q6IEG0 339 aaKnown RBP14.93□□□□□ -0.02
SDC2-201ENST00000302190 LRIG3Q6UXM1 1119 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 ARMC9Q7Z3E5 817 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 NCAPG2Q86XI2 1143 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 RBM15Q96T37 977 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■□□□□ 11.3
SDC2-201ENST00000302190 KCNMB3Q9NPA1 279 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 CCDC88AQ3V6T2 1871 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 NID2Q14112 1375 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 DIAPH2O60879 1101 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 RPS6P62753 249 aaKnown RBP14.93□□□□□ -0.02
SDC2-201ENST00000302190 ITIH3Q06033 890 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
SDC2-201ENST00000302190 GNPTABQ3T906 1256 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 TRPM8Q7Z2W7 1104 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 PYROXD1Q8WU10 500 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 WNT8AQ9H1J5 351 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 TXNDC16Q9P2K2 825 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 CCT8L1PA6NM43 557 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 ARSEP51690 589 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 MUM1Q2TAK8 710 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 ZC3H18Q86VM9 953 aaKnown RBP14.93□□□□□ -0.02
SDC2-201ENST00000302190 PAF1Q8N7H5 531 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 WDR18Q9BV38 432 aa14.93□□□□□ -0.02
SDC2-201ENST00000302190 CDC42EP4Q9H3Q1 356 aaKnown RBP14.93□□□□□ -0.02
SDC2-201ENST00000302190 TCRBV7S2A1N4TA0A589 114 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 TROVE2P10155 538 aaKnown RBP eCLIP14.92□□□□□ -0.02
SDC2-201ENST00000302190 C6orf163Q5TEZ5 329 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 SYT17Q9BSW7 474 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.92□□□□□ -0.02
SDC2-201ENST00000302190 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 CCDC160A6NGH7 325 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 RARAP10276 462 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 KITP10721 976 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 SAT1P21673 171 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 YY1P25490 414 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 TGFB2P61812 414 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 ZSWIM2Q8NEG5 633 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 CCDC110Q8TBZ0 833 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 C10orf88Q9H8K7 445 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 FAM198AQ9UFP1 575 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 ZNRF3Q9ULT6 936 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 MTMR2Q13614 643 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 ZCWPW2Q504Y3 356 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 CCDC62Q6P9F0 684 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 C7orf31Q8N865 590 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 POLR3CQ9BUI4 534 aaPredicted RBP14.92□□□□□ -0.02
SDC2-201ENST00000302190 HEY1Q9Y5J3 304 aa14.92□□□□□ -0.02
SDC2-201ENST00000302190 PTENP60484 403 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 NOP14P78316 857 aaKnown RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 CRYMQ14894 314 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 TAF11Q15544 211 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms