RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZBTB8OSQ8IWT0 167 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 FAF2Q96CS3 445 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 METTL5Q9NRN9 209 aaKnown RBP14.11□□□□□ -0.15
CASC4-201ENST00000299957 TXLNGQ9NUQ3 528 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 POLR2BP30876 1174 aaKnown RBP14.11□□□□□ -0.15
CASC4-201ENST00000299957 RGS7P49802 495 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 PSMC1P62191 440 aaKnown RBP14.11□□□□□ -0.15
CASC4-201ENST00000299957 PSMC5P62195 406 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 APOBEC3HQ6NTF7 200 aaKnown RBP14.11□□□□□ -0.15
CASC4-201ENST00000299957 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 LRRN4Q8WUT4 740 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 GBP5Q96PP8 586 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 TUFT1Q9NNX1 390 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 FAM53CQ9NYF3 392 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 TJP3O95049 919 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 HLA-DRAP01903 254 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 CREB1P16220 341 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 MAGEA4P43358 317 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 WDR72Q3MJ13 1102 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 ISLR2Q6UXK2 745 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 NOP9Q86U38 636 aaKnown RBP14.11□□□□□ -0.15
CASC4-201ENST00000299957 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
CASC4-201ENST00000299957 ARL2BPQ9Y2Y0 163 aa14.11□□□□□ -0.15
CASC4-201ENST00000299957 TMCO4Q5TGY1 634 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 SV2AQ7L0J3 742 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 FAM161BQ96MY7 647 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 TMEM121Q9BTD3 319 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 KCTD10Q9H3F6 313 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 STK32BQ9NY57 414 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 CDH16O75309 829 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 ANP32DO95626 131 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 SPATA31C1P0DKV0 1188 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 BRD2P25440 801 aaKnown RBP14.1□□□□□ -0.15
CASC4-201ENST00000299957 SREBF1P36956 1147 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 PTENP60484 403 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 ANKRD20A8PQ5CZ79 823 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 LRRC71Q8N4P6 559 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 WRNIP1Q96S55 665 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 ASTN1O14525 1302 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 AFF2P51816 1311 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 LTN1O94822 1766 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 KCNJ2P63252 427 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 LGSNQ5TDP6 509 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 FUKQ8N0W3 1084 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 EMC1Q8N766 993 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 AKAP12Q02952 1782 aa14.1□□□□□ -0.15
CASC4-201ENST00000299957 TRAPPC3O43617 180 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 CPP00450 1065 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 ETS1P14921 441 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 IFT122Q9HBG6 1241 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 TRAF3IP3Q9Y228 551 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 PCDHA10Q9Y5I2 948 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 ATRNO75882 1429 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 TGFB1I1O43294 461 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 PPFIA2O75334 1257 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 PSAPP07602 524 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 C3orf62Q6ZUJ4 267 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 OTOP1Q7RTM1 612 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 FAM160B2Q86V87 743 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 GPD1LQ8N335 351 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 RBBP8NLQ8NC74 664 aaPredicted RBP14.09□□□□□ -0.15
CASC4-201ENST00000299957 TMEM35BQ8NCS4 154 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 MXRA8Q9BRK3 442 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 FAM129AQ9BZQ8 928 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 RNF19AQ9NV58 838 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
CASC4-201ENST00000299957 RGPD2P0DJD1 1756 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 BANF1O75531 89 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 LMNB2Q03252 620 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 LVRNQ6Q4G3 990 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 EP400NLQ6ZTU2 488 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 C1orf131Q8NDD1 294 aaKnown RBP14.09□□□□□ -0.15
CASC4-201ENST00000299957 RAB3IL1Q8TBN0 382 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
CASC4-201ENST00000299957 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
CASC4-201ENST00000299957 CST8O60676 142 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 ZBED1O96006 694 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 APRTP07741 180 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 KRT4P19013 534 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 HNRNPH3P31942 346 aaKnown RBP14.08□□□□□ -0.15
CASC4-201ENST00000299957 CDR2Q01850 454 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 ZNF699Q32M78 642 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 PRELID2Q8N945 189 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 TRIM55Q9BYV6 548 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 FAM49AQ9H0Q0 323 aaPredicted RBP14.08□□□□□ -0.15
CASC4-201ENST00000299957 VCXQ9H320 206 aa14.08□□□□□ -0.15
CASC4-201ENST00000299957 CPSF2Q9P2I0 782 aaKnown RBP14.08□□□□□ -0.15
CASC4-201ENST00000299957 COPEO14579 308 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 TBX3O15119 743 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 GH1P01241 217 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 FGRP09769 529 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 GTF2H1P32780 548 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 SKOR1P84550 965 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 DDR1Q08345 913 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 HIF1AQ16665 826 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 RNF149Q8NC42 400 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms