RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 SCINQ9Y6U3 715 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 PASKQ96RG2 1323 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 GOLGA8MH3BSY2 632 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 ITIH3Q06033 890 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 CCDC14Q49A88 953 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
GABRB3-201ENST00000299267 SAMD3Q8N6K7 520 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 ASAP3Q8TDY4 903 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 DHX35Q9H5Z1 703 aaKnown RBP10.84□□□□□ -0.67
GABRB3-201ENST00000299267 NKIRAS1Q9NYS0 192 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 SYNPO2Q9UMS6 1093 aa10.84□□□□□ -0.67
GABRB3-201ENST00000299267 MCF2LO15068 1137 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ECEL1O95672 775 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 KRT3P12035 628 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 AKR1A1P14550 325 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 BCAR1P56945 870 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 RFFLQ8WZ73 363 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 EHD2Q9NZN4 543 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 TBK1Q9UHD2 729 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 DBR1Q9UK59 544 aaKnown RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ZNF214Q9UL59 606 aaPredicted RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 CYP3A7-CYP3A51PA0A087WV96 503 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 POMCP01189 267 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 CYP3A7P24462 503 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 DLG4P78352 724 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 SP3Q02447 781 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 DHX9Q08211 1270 aaKnown RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ARSHQ5FYA8 562 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 MPZL3Q6UWV2 235 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ACOT1Q86TX2 421 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 SMC1BQ8NDV3 1235 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 CLEC4DQ8WXI8 215 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ZNF560Q96MR9 790 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 VTA1Q9NP79 307 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 PLAGL2Q9UPG8 496 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ATP11BQ9Y2G3 1177 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 BAZ2AQ9UIF9 1905 aaKnown RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 PRRC2BQ5JSZ5 2229 aaKnown RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 CDH8P55286 799 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 BRD3Q15059 726 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 ENOSF1Q7L5Y1 443 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 TRAPPC11Q7Z392 1133 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 RYBPQ8N488 228 aaPredicted RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 DNAAF3Q8N9W5 541 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 KAT5Q92993 513 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 EDEM3Q9BZQ6 932 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 TMEM117Q9H0C3 514 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 STMN4Q9H169 189 aaPredicted RBP10.83□□□□□ -0.68
GABRB3-201ENST00000299267 WDR70Q9NW82 654 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 DPP3Q9NY33 737 aa10.83□□□□□ -0.68
GABRB3-201ENST00000299267 COL16A1Q07092 1604 aaPredicted RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SMTNL2Q2TAL5 461 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SPRYD7Q5W111 196 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 NIPA1Q7RTP0 329 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ZC3H18Q86VM9 953 aaKnown RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ARFGAP2Q8N6H7 521 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ZNF507Q8TCN5 953 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 GRK7Q8WTQ7 553 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 PBKQ96KB5 322 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 NIF3L1Q9GZT8 377 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CASTOR2A6NHX0 329 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 RGS16O15492 202 aaPredicted RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ADCY3O60266 1144 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 ALDH1A1P00352 501 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CALB1P05937 261 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 HMBSP08397 361 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 MMEP08473 750 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 PDGFRAP16234 1089 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 GRIK1P39086 918 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 HSD17B4P51659 736 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 DR1Q01658 176 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 MFSD10Q14728 455 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SLC20A1Q8WUM9 679 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SLC35C1Q96A29 364 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 MCEEQ96PE7 176 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 OGFRQ9NZT2 677 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 PCDHB2Q9Y5E7 798 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 MYH14Q7Z406 1995 aaKnown RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 FRMPD4Q14CM0 1322 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CBWD6Q4V339 395 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CBWD3Q5JTY5 395 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CBWD5Q5RIA9 395 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 KIAA0319LQ8IZA0 1049 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 CEP120Q8N960 986 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 C1orf131Q8NDD1 294 aaKnown RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SHISA4Q96DD7 197 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 INPP4AQ96PE3 977 aaPredicted RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 GOLGA4Q13439 2230 aaKnown RBP10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SPATA31C2B4DYI2 1134 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SLC26A4O43511 780 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 MAP3K6O95382 1288 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 GLRA2P23416 452 aa10.82□□□□□ -0.68
GABRB3-201ENST00000299267 SLC26A2P50443 739 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms