RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 SETDB1Q15047 1291 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 CLEC16AQ2KHT3 1053 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 ZNF677Q86XU0 584 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 ECHDC2Q86YB7 292 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 MGARPQ8TDB4 240 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 TMC2Q8TDI7 906 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 DHX38Q92620 1227 aaKnown RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 TTC25Q96NG3 672 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 ZC3H12CQ9C0D7 883 aaKnown RBP20.43■□□□□ 0.86
TRA2A-201ENST00000297071 HSPBP1Q9NZL4 362 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 ATRNL1Q5VV63 1379 aa20.43■□□□□ 0.86
TRA2A-201ENST00000297071 PPEF1O14829 653 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 DCTN3O75935 186 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 DLATP10515 647 aaKnown RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 PLS3P13797 630 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 PAX7P23759 505 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 HOXA13P31271 388 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 GCLMP48507 274 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 SATB1Q01826 763 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 KYNUQ16719 465 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 ABCB5Q2M3G0 1257 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 CDCA2Q69YH5 1023 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 ZNF746Q6NUN9 644 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 NIPA1Q7RTP0 329 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 ANKRD42Q8N9B4 389 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 ZNF398Q8TD17 642 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 RMDN2Q96LZ7 410 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 LXNQ9BS40 222 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 PITPNM3Q9BZ71 974 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 WRAP73Q9P2S5 460 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 PNMA3Q9UL41 463 aa20.42■□□□□ 0.86
TRA2A-201ENST00000297071 SMG5Q9UPR3 1016 aaKnown RBP20.42■□□□□ 0.86
TRA2A-201ENST00000297071 CYP26A1O43174 497 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 GRIN3BO60391 1043 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 PLA2G6O60733 806 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ZC3H11AO75152 810 aaKnown RBP eCLIP20.41■□□□□ 0.861e-8■□□□□ 9.5
TRA2A-201ENST00000297071 ASMTLO95671 621 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 RASSF2P50749 326 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 KLF1Q13351 362 aaPredicted RBP20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ANKRD20A2Q5SQ80 823 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 WASHC2DQ5SRD0 308 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ANKRD20A1Q5TYW2 823 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ANKRD20A3Q5VUR7 823 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 KRT39Q6A163 491 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 OTUD6AQ7L8S5 288 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 PTF1AQ7RTS3 328 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ANKS1BQ7Z6G8 1248 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ERICH1Q86X53 443 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ENDOVQ8N8Q3 282 aaKnown RBP20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ANKLE1Q8NAG6 615 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 HELQQ8TDG4 1101 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 DENND1AQ8TEH3 1009 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 C1orf54Q8WWF1 131 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 TMEM8AQ9HCN3 771 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 SSU72Q9NP77 194 aaKnown RBP20.41■□□□□ 0.86
TRA2A-201ENST00000297071 A6NHS1 94 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 ZBTB39O15060 712 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 PSTPIP1O43586 416 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 GNAZP19086 355 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 MAPK4P31152 587 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 PPP1R2P3Q6NXS1 205 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 SLC47A2Q86VL8 602 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 RDH13Q8NBN7 331 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 PLEKHO2Q8TD55 490 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 CFAP57Q96MR6 1250 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 RNPEPL1Q9HAU8 725 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 CHST7Q9NS84 486 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 LRRC4BQ9NT99 713 aa20.41■□□□□ 0.86
TRA2A-201ENST00000297071 NEBLO76041 1014 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 P4HBP07237 508 aaKnown RBP20.4■□□□□ 0.86
TRA2A-201ENST00000297071 ALDH3A1P30838 453 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 MOGSQ13724 837 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 CCDC142Q17RM4 750 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 FAM196AQ6ZSG2 479 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 TRABD2AQ86V40 505 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 ZFPM1Q8IX07 1006 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 ZCCHC9Q8N567 271 aaKnown RBP20.4■□□□□ 0.86
TRA2A-201ENST00000297071 ARMC2Q8NEN0 867 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 DDX27Q96GQ7 796 aaKnown RBP20.4■□□□□ 0.86
TRA2A-201ENST00000297071 NT5C1BQ96P26 610 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 POP1Q99575 1024 aaKnown RBP20.4■□□□□ 0.86
TRA2A-201ENST00000297071 FAM198AQ9UFP1 575 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 EXOC7Q9UPT5 735 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 MRPL11Q9Y3B7 192 aaKnown RBP20.4■□□□□ 0.86
TRA2A-201ENST00000297071 WDR81Q562E7 1941 aa20.4■□□□□ 0.86
TRA2A-201ENST00000297071 DDTLA6NHG4 134 aaPredicted RBP20.39■□□□□ 0.86
TRA2A-201ENST00000297071 ATMINO43313 823 aaPredicted RBP20.39■□□□□ 0.86
TRA2A-201ENST00000297071 LMNAP02545 664 aaKnown RBP20.39■□□□□ 0.86
TRA2A-201ENST00000297071 UNGP13051 313 aaPredicted RBP20.39■□□□□ 0.86
TRA2A-201ENST00000297071 GYS1P13807 737 aa20.39■□□□□ 0.86
TRA2A-201ENST00000297071 IBSPP21815 317 aaPredicted RBP20.39■□□□□ 0.86
TRA2A-201ENST00000297071 CALB2P22676 271 aa20.39■□□□□ 0.86
TRA2A-201ENST00000297071 FOXN2P32314 431 aa20.39■□□□□ 0.86
TRA2A-201ENST00000297071 NCKAP1LP55160 1127 aa20.39■□□□□ 0.86
TRA2A-201ENST00000297071 IKQ13123 557 aaPredicted RBP20.39■□□□□ 0.86
TRA2A-201ENST00000297071 SPARCL1Q14515 664 aa20.39■□□□□ 0.86
TRA2A-201ENST00000297071 ZC3H12AQ5D1E8 599 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms