RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 KDM4CQ9H3R0 1056 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 A1CFQ9NQ94 594 aaKnown RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 OLFML3Q9NRN5 406 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 A0A0A6YYK5 440 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 KRT19P08727 400 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 CNGA1P29973 690 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 MMP13P45452 471 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 COPS2P61201 443 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 ORC1Q13415 861 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 MUM1Q2TAK8 710 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 KRT39Q6A163 491 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 SH3BP5LQ7L8J4 393 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 EEPD1Q7L9B9 569 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 FITM2Q8N6M3 262 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 TTC17Q96AE7 1141 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 SNF8Q96H20 258 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 KREMEN1Q96MU8 473 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 LRRC37BQ96QE4 947 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 TMEM39BQ9GZU3 492 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 ARL2BPQ9Y2Y0 163 aa14.16□□□□□ -0.14
TNFRSF21-201ENST00000296861 KAT6AQ92794 2004 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 TIAM2Q8IVF5 1701 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 KITP10721 976 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 ARSEP51690 589 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 KCNT1Q5JUK3 1230 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 SLFN11Q7Z7L1 901 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 MCUR1Q96AQ8 359 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 POLR3CQ9BUI4 534 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 TMEM206Q9H813 350 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 UBN1Q9NPG3 1134 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 GINM1Q9NU53 330 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 SUGT1Q9Y2Z0 365 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 LGR5O75473 907 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 BASP1P80723 227 aaKnown RBP14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 PDIA2Q13087 525 aaKnown RBP14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 RRP1BQ14684 758 aaKnown RBP14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 DLGAP5Q15398 846 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 HYIQ5T013 277 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 CCDC33Q8N5R6 958 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 FBXL13Q8NEE6 735 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 LRRN4Q8WUT4 740 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 GGA2Q9UJY4 613 aa14.15□□□□□ -0.14
TNFRSF21-201ENST00000296861 CALRP27797 417 aaKnown RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 LIN9Q5TKA1 542 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 ARHGEF16Q5VV41 709 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 TLCD1Q96CP7 247 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 CYTH2Q99418 400 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 IQCGQ9H095 443 aaKnown RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 RAB20Q9NX57 234 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 MYH7BA7E2Y1 1941 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 HSPA6P17066 643 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 QARSP47897 775 aaKnown RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 NCALDP61601 193 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 STRN3Q13033 797 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 XRCC4Q13426 336 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 MPP2Q14168 576 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 BSPRYQ5W0U4 402 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 APBB1IPQ7Z5R6 666 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 PGM2Q96G03 612 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 ZNF317Q96PQ6 595 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 MARCOQ9UEW3 520 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 C21orf2O43822 256 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 BAG2O95816 211 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 ADRA2BP18089 450 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 PTGIRP43119 386 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 FASTKD3Q14CZ7 662 aaKnown RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 Q4G0T1 1027 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 ARHGAP27Q6ZUM4 889 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 PALM2Q8IXS6 379 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 ANKRD35Q8N283 1001 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 CCDC89Q8N998 374 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 P3H4Q92791 437 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 FAM163AQ96GL9 167 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 TRABDQ9H4I3 376 aa14.14□□□□□ -0.15
TNFRSF21-201ENST00000296861 TBX3O15119 743 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 FMO1Q01740 532 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 SV2AQ7L0J3 742 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 NLRX1Q86UT6 975 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 SIAH1Q8IUQ4 282 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 HIPK4Q8NE63 616 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 PLEKHO2Q8TD55 490 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 OSBPL8Q9BZF1 889 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 TUFT1Q9NNX1 390 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 NINJ2Q9NZG7 142 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 LTBP4Q8N2S1 1624 aa14.13□□□□□ -0.15
TNFRSF21-201ENST00000296861 TTC4O95801 387 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms