RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 THP07101 528 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 RARRES1P49788 294 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 SNW1Q13573 536 aaKnown RBP11.65□□□□□ -0.55
RFC4-201ENST00000296273 SLC44A4Q53GD3 710 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 FAM171A1Q5VUB5 890 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 CEP57Q86XR8 500 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 MAML2Q8IZL2 1156 aaPredicted RBP11.65□□□□□ -0.55
RFC4-201ENST00000296273 LNX1Q8TBB1 728 aaPredicted RBP11.65□□□□□ -0.55
RFC4-201ENST00000296273 ASAP3Q8TDY4 903 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.55
RFC4-201ENST00000296273 PPP1R9BQ96SB3 815 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 NELL2Q99435 816 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 CLSTN3Q9BQT9 956 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 RPP25Q9BUL9 199 aaKnown RBP11.65□□□□□ -0.55
RFC4-201ENST00000296273 BRMS1Q9HCU9 246 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 SPATA6Q9NWH7 488 aaPredicted RBP11.65□□□□□ -0.55
RFC4-201ENST00000296273 KLK14Q9P0G3 267 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 PCDHGA2Q9Y5H1 932 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 DOCK8Q8NF50 2099 aa11.65□□□□□ -0.55
RFC4-201ENST00000296273 TCHHQ07283 1943 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 SYCE3A1L190 88 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 POTEMA6NI47 508 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 N4BP3O15049 544 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 B4GALT5O43286 388 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 YEATS4O95619 227 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 FDPSP14324 419 aaKnown RBP11.64□□□□□ -0.55
RFC4-201ENST00000296273 UBXN2BQ14CS0 331 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 FAM187BQ17R55 369 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
RFC4-201ENST00000296273 CDR2LQ86X02 465 aaPredicted RBP11.64□□□□□ -0.55
RFC4-201ENST00000296273 ZBTB8OSQ8IWT0 167 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 MCPH1Q8NEM0 835 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 ADPGKQ9BRR6 497 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 POLR3FQ9H1D9 316 aaPredicted RBP11.64□□□□□ -0.55
RFC4-201ENST00000296273 GDPD2Q9HCC8 539 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 LTB4R2Q9NPC1 389 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 NCDNQ9UBB6 729 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 POLIQ9UNA4 740 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 FANCMQ8IYD8 2048 aa11.64□□□□□ -0.55
RFC4-201ENST00000296273 A0A1W2PQ27 194 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 A0A1W2PQ64 194 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 A0A1W2PQD8 194 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 CASTOR2A6NHX0 329 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 LRRIQ4A6NIV6 560 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 FAM170BA6NMN3 283 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 CCL16O15467 120 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 KIF4AO95239 1232 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 CCDC192P0DO97 292 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 KRT2P35908 639 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 RAB33AQ14088 237 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 SAFBQ15424 915 aaKnown RBP eCLIP11.63□□□□□ -0.55
RFC4-201ENST00000296273 FOXD4L6Q3SYB3 417 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 ZBTB41Q5SVQ8 909 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 CDCA2Q69YH5 1023 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 FOXD4L3Q6VB84 417 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 DCLK2Q8N568 766 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 ZBTB44Q8NCP5 570 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 HASPINQ8TF76 798 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 RABGGTAQ92696 567 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 TRIM44Q96DX7 344 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 FZD8Q9H461 694 aa11.63□□□□□ -0.55
RFC4-201ENST00000296273 TTC12Q9H892 705 aaPredicted RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 MRPS17Q9Y2R5 130 aaKnown RBP11.63□□□□□ -0.55
RFC4-201ENST00000296273 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 PRR5-ARHGAP8B1AHC4 643 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 PTGESO14684 152 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
RFC4-201ENST00000296273 LRRN2O75325 713 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
RFC4-201ENST00000296273 NTHL1P78549 312 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 ARHGAP8P85298 464 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 CALCRLQ16602 461 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 RSPO4Q2I0M5 234 aaPredicted RBP11.62□□□□□ -0.55
RFC4-201ENST00000296273 PABPC1LQ4VXU2 614 aaKnown RBP11.62□□□□□ -0.55
RFC4-201ENST00000296273 PIGOQ8TEQ8 1089 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 CLDN23Q96B33 292 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 FAM126AQ9BYI3 521 aaPredicted RBP11.62□□□□□ -0.55
RFC4-201ENST00000296273 NUP62CLQ9H1M0 184 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 ZSCAN32Q9NX65 697 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 SNTG2Q9NY99 539 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 GDE1Q9NZC3 331 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 MTRRQ9UBK8 725 aa11.62□□□□□ -0.55
RFC4-201ENST00000296273 MYH15Q9Y2K3 1946 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 TRAPPC3O43617 180 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 ECI2O75521 394 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 RECQL4O94761 1208 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 ATP2B1P20020 1258 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 OR1D2P34982 312 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 CSTF1Q05048 431 aaKnown RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 PRPF4BQ13523 1007 aaKnown RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 NAB2Q15742 525 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms