RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TBC1D17Q9HA65 648 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 PIDD1Q9HB75 910 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 POLD4Q9HCU8 107 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 EPS15L1Q9UBC2 864 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 WNT16Q9UBV4 365 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 STK39Q9UEW8 545 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 ADAM28Q9UKQ2 775 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 SSX2IPQ9Y2D8 614 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 R4GN57 208 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 STK36Q9NRP7 1315 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 MIA3Q5JRA6 1907 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 TRIM66O15016 1216 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 ADAM12O43184 909 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 USO1O60763 962 aaKnown RBP10.29□□□□□ -0.76
CNOT9-202ENST00000295701 TADA2AO75478 443 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 CDKL5O76039 1030 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 LYPLA2O95372 231 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 EDN1P05305 212 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 LAMP2P13473 410 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 NDUFV2P19404 249 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 KRT2P35908 639 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 TXKP42681 527 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 RARRES1P49788 294 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 POU5F1BQ06416 359 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 NCBP1Q09161 790 aaKnown RBP10.29□□□□□ -0.76
CNOT9-202ENST00000295701 TFDP1Q14186 410 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 CALCRLQ16602 461 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 USP41Q3LFD5 358 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 RTP2Q5QGT7 225 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 CCDC51Q96ER9 411 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 CLSTN3Q9BQT9 956 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
CNOT9-202ENST00000295701 ANKEF1Q9NU02 776 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 SNTG2Q9NY99 539 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 FNIP2Q9P278 1114 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 PCDHA12Q9UN75 941 aa10.29□□□□□ -0.76
CNOT9-202ENST00000295701 A0A1B0GUA9 196 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 LRRIQ4A6NIV6 560 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 BTBD18B2RXH4 712 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 ANHXE9PGG2 379 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 EPB41L2O43491 1005 aaKnown RBP10.28□□□□□ -0.76
CNOT9-202ENST00000295701 JAK2O60674 1132 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 PAPLNO95428 1278 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 SPATA31C1P0DKV0 1188 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 SRFP11831 508 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 GLULP15104 373 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 XBP1P17861 261 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 HTR4Q13639 388 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 SLC27A1Q6PCB7 646 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 PARM1Q6UWI2 310 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 CYP26C1Q6V0L0 522 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 GRASPQ7Z6J2 395 aaPredicted RBP10.28□□□□□ -0.76
CNOT9-202ENST00000295701 CEP57Q86XR8 500 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 KCNG4Q8TDN1 519 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 BSNDQ8WZ55 320 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 STAMQ92783 540 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 FGF14Q92915 247 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 MRGPRX2Q96LB1 330 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 NAP1L4Q99733 375 aaKnown RBP10.28□□□□□ -0.76
CNOT9-202ENST00000295701 RHOBTB2Q9BYZ6 727 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 FOXQ1Q9C009 403 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 PLEKHA4Q9H4M7 779 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 DLGAP2Q9P1A6 1054 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 NUMBLQ9Y6R0 609 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 DNAH14Q0VDD8 3507 aa10.28□□□□□ -0.76
CNOT9-202ENST00000295701 ZNF292O60281 2723 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 PTGESO14684 152 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 CCL16O15467 120 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 MED24O75448 989 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 KIF4AO95239 1232 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 AVPP01185 164 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 LIG1P18858 919 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 RFX1P22670 979 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 FSHRP23945 695 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 ID4P47928 161 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 GPC5P78333 572 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 GRIK3Q13003 919 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 ME3Q16798 604 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 FAM171A1Q5VUB5 890 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 EEF1DP3Q658K8 133 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 RSPO2Q6UXX9 243 aaPredicted RBP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 ITFG1Q8TB96 612 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 LNX1Q8TBB1 728 aaPredicted RBP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 MTMR9Q96QG7 549 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 NFKBIZQ9BYH8 718 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 PDZD7Q9H5P4 517 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 ZDHHC7Q9NXF8 308 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNOT9-202ENST00000295701 DPP7Q9UHL4 492 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 FBXW11Q9UKB1 542 aa10.27□□□□□ -0.77
CNOT9-202ENST00000295701 OTOGLQ3ZCN5 2332 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms