RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CHRNA3P32297 505 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 GNL1P36915 607 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 FRA10AC1Q70Z53 315 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLC4A9Q96Q91 983 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 SH3BP1Q9Y3L3 701 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 ODC1P11926 461 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 PRAMEP78395 509 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 SPATS2Q86XZ4 545 aaKnown RBP18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 P2RX7Q99572 595 aaKnown RBP18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 TCRBV5S4A2TA0A5A2 114 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLC12A1Q13621 1099 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 C6orf118Q5T5N4 469 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 DNAJC17Q9NVM6 304 aaKnown RBP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 H3BRB1 525 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 ADCY2Q08462 1091 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 PID1Q7Z2X4 250 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 DHX40Q8IX18 779 aaKnown RBP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 TUT1Q9H6E5 874 aaKnown RBP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 VTA1Q9NP79 307 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 PCDHB8Q9UN66 801 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 SSTR3P32745 418 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 BCAS4Q8TDM0 211 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 DFFAO00273 331 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 ACSL3O95573 720 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 AKR1A1P14550 325 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 ZNF211Q13398 564 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 Q4G0T1 1027 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 TRIM67Q6ZTA4 783 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 RMDN1Q96DB5 314 aa18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 CNOT10Q9H9A5 744 aaKnown RBP18.72■□□□□ 0.59
CDC42EP3-201ENST00000295324 ATN1P54259 1190 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLC7A5Q01650 507 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 RFC1P35251 1148 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 CCT5P48643 541 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 ARID5BQ14865 1188 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 ARHGAP15Q53QZ3 475 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 ALS2CLQ60I27 953 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 N4BP2L2Q92802 583 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 FAM49BQ9NUQ9 324 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 H7C4K7 107 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 MTG1Q9BT17 334 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 ADGRG1Q9Y653 693 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 KIF20BQ96Q89 1820 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 LRG1P02750 347 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 MX2P20592 715 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 TM4SF1P30408 202 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 SYNPO2Q9UMS6 1093 aa18.71■□□□□ 0.59
CDC42EP3-201ENST00000295324 B3GAT3O94766 335 aa18.71■□□□□ 0.58
CDC42EP3-201ENST00000295324 PPIL2Q13356 520 aa18.71■□□□□ 0.58
CDC42EP3-201ENST00000295324 DDX53Q86TM3 631 aaKnown RBP18.71■□□□□ 0.58
CDC42EP3-201ENST00000295324 TRIM59Q8IWR1 403 aa18.71■□□□□ 0.58
CDC42EP3-201ENST00000295324 ASAP3Q8TDY4 903 aa18.71■□□□□ 0.58
CDC42EP3-201ENST00000295324 NVLO15381 856 aaKnown RBP18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 HSPA8P11142 646 aaKnown RBP18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 KCNB2Q92953 911 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 SENP7Q9BQF6 1050 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 DDX4Q9NQI0 724 aaKnown RBP18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 FIS1Q9Y3D6 152 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 PPME1Q9Y570 386 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 SSU72P8A0A1W2PR75 194 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 SNX2O60749 519 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 KIZQ2M2Z5 673 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 FAM200BP0CF97 657 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 EFHC1Q5JVL4 640 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 ARHGAP18Q8N392 663 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 GRID2IPA4D2P6 1211 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 CASP2P42575 452 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 SLC18A3Q16572 532 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 KLHL38Q2WGJ6 581 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 ATG16L1Q676U5 607 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 TRAPPC11Q7Z392 1133 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 EXT2Q93063 718 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 AGPAT3Q9NRZ7 376 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 DPP3Q9NY33 737 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 TTC7AQ9ULT0 858 aaPredicted RBP18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 NFU1Q9UMS0 254 aa18.7■□□□□ 0.58
CDC42EP3-201ENST00000295324 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 E5RI56 91 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 PIGHQ14442 188 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 MPZL3Q6UWV2 235 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 CDR2LQ86X02 465 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 OR6P1Q8NGX9 317 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 KIFC3Q9BVG8 833 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 AGO4Q9HCK5 861 aaKnown RBP18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 A0A1B0GTH6 734 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 PIK3R2O00459 728 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 ITGB3P05106 788 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 HMBSP08397 361 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 DEUP1Q05D60 604 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 PGBD3Q8N328 593 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 TTC8Q8TAM2 541 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms