RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 RFFLQ8WZ73 363 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 MSTO1Q9BUK6 570 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 UPF3AQ9H1J1 476 aaKnown RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 TOPORSQ9NS56 1045 aaPredicted RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 PTPRJQ12913 1337 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 SRGAP2CP0DJJ0 459 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 DNA2P51530 1060 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 AP3M2P53677 418 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 ZBTB41Q5SVQ8 909 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 MPZL3Q6UWV2 235 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 PEX26Q7Z412 305 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 TLK2Q86UE8 772 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 ZNF410Q86VK4 478 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 TRPV1Q8NER1 839 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 SHC3Q92529 594 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 MINDY3Q9H8M7 445 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDPN-201ENST00000294489 PRMT7Q9NVM4 692 aaPredicted RBP9.84□□□□□ -0.83
PDPN-201ENST00000294489 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 ANKFY1Q9P2R3 1169 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 SCN10AQ9Y5Y9 1956 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 NRCAMQ92823 1304 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 CES2O00748 559 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 TNPO2O14787 897 aaKnown RBP9.84□□□□□ -0.83
PDPN-201ENST00000294489 OGTO15294 1046 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 TOMM70O94826 608 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 TBC1D8O95759 1140 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 CYBAP13498 195 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 ABCB4P21439 1286 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 CYP2C19P33261 490 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 PHKA2P46019 1235 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 GCNT1Q02742 428 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 PPFIA1Q13136 1202 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 DAAM2Q86T65 1068 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 KIAA0319LQ8IZA0 1049 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 LRRC57Q8N9N7 239 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 KAT5Q92993 513 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 ZBTB10Q96DT7 871 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 CALR3Q96L12 384 aaKnown RBP9.84□□□□□ -0.83
PDPN-201ENST00000294489 KREMEN1Q96MU8 473 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 SELENOOQ9BVL4 669 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 ADAMTS10Q9H324 1103 aa9.84□□□□□ -0.83
PDPN-201ENST00000294489 RBAKQ9NYW8 714 aaPredicted RBP9.84□□□□□ -0.83
PDPN-201ENST00000294489 ABT1Q9ULW3 272 aaKnown RBP9.84□□□□□ -0.83
PDPN-201ENST00000294489 NCANO14594 1321 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 CLDN3O15551 220 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 KIF4AO95239 1232 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 VNN1O95497 513 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 GJB1P08034 283 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 ACOT2P49753 483 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 CPT1AP50416 773 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 FCGRTP55899 365 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 LACTBP83111 547 aaPredicted RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 PRPF4BQ13523 1007 aaKnown RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 BEND6Q5SZJ8 279 aaPredicted RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 TDRD10Q5VZ19 366 aaKnown RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 HDXQ7Z353 690 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 RHOT2Q8IXI1 618 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 RPUSD2Q8IZ73 545 aaKnown RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 SLC35G2Q8TBE7 412 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 PBKQ96KB5 322 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 ABCB6Q9NP58 842 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 C1orf112Q9NSG2 853 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 PACSIN2Q9UNF0 486 aaPredicted RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 SMIM35A0A1B0GVV1 85 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 KCNK3O14649 394 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 DYNC1LI2O43237 492 aaPredicted RBP9.83□□□□□ -0.84
PDPN-201ENST00000294489 CYP2B6P20813 491 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 TMOD1P28289 359 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 PDE6CP51160 858 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 CDC42EP1Q00587 391 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 NOGQ13253 232 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 SURF1Q15526 300 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 ATF7IP2Q5U623 682 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 SLFN11Q7Z7L1 901 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 WDR49Q8IV35 697 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 SLC20A1Q8WUM9 679 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 RUBCNQ92622 972 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 FUT8Q9BYC5 575 aa9.83□□□□□ -0.84
PDPN-201ENST00000294489 CYP26A1O43174 497 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 SGPL1O95470 568 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 SMIM10L2AP0DMW4 78 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 SMIM10L2BP0DMW5 78 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 GZMAP12544 262 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 BIRC3Q13489 604 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 TCEAL1Q15170 157 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 METTL13Q8N6R0 699 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 MS4A14Q96JA4 679 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 TCHPQ9BT92 498 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 PDE11AQ9HCR9 933 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 AMFRQ9UKV5 643 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 CNTN6Q9UQ52 1028 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 FRMPD3Q5JV73 1810 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 KPNA6O60684 536 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 RTN2O75298 545 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 DUSP11O75319 330 aaKnown RBP9.82□□□□□ -0.84
PDPN-201ENST00000294489 GPR32O75388 356 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 FTLP02792 175 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms