RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 IGLV3-22A0A075B6J6 115 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 RRM1P23921 792 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 CIITAP33076 1130 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 LONP2Q86WA8 852 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 ALG13Q9NP73 1137 aaKnown RBP15.66■□□□□ 0.1
CCNF-201ENST00000293968 BATF3Q9NR55 127 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 FOXN2P32314 431 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 ATL2Q8NHH9 583 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 TAS1R2Q8TE23 839 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 MORC4Q8TE76 937 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 CRYGNQ8WXF5 182 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 SEMA4DQ92854 862 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 FIZ1Q96SL8 496 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 C11orf70Q9BRQ4 267 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 LRRC19Q9H756 370 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 TDRD3Q9H7E2 651 aaKnown RBP15.65■□□□□ 0.1
CCNF-201ENST00000293968 ATP8B3O60423 1300 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 O00370 1275 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 CBX6O95503 412 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 ALAS1P13196 640 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 PLS3P13797 630 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 NSFP46459 744 aaKnown RBP15.65■□□□□ 0.1
CCNF-201ENST00000293968 SMC6Q96SB8 1091 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 UVRAGQ9P2Y5 699 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 PHTF1Q9UMS5 762 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 ABCA3Q99758 1704 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 ADRB2P07550 413 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 GZMAP12544 262 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 MMP14P50281 582 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 CPXCR1Q8N123 301 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 ERFP50548 548 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 SNRNP35Q16560 246 aaKnown RBP15.65■□□□□ 0.1
CCNF-201ENST00000293968 XKR9Q5GH70 373 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 CSRNP1Q96S65 589 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 TRABDQ9H4I3 376 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 ARHGEF3Q9NR81 526 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 LRRC4BQ9NT99 713 aa15.65■□□□□ 0.1
CCNF-201ENST00000293968 NOCTQ9UK39 431 aaKnown RBP15.65■□□□□ 0.1
CCNF-201ENST00000293968 MAPK13O15264 365 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 MAGEA4P43358 317 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 CDR2Q01850 454 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 MTFR1Q15390 333 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 SIX1Q15475 284 aaPredicted RBP15.64■□□□□ 0.09
CCNF-201ENST00000293968 SIAH1Q8IUQ4 282 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 PLEKHO2Q8TD55 490 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 POMGNT1Q8WZA1 660 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 PPP1R12CQ9BZL4 782 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 DCLK3Q9C098 648 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 NKX1-2Q9UD57 310 aaPredicted RBP15.64■□□□□ 0.09
CCNF-201ENST00000293968 UNC5CO95185 931 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 GJB6O95452 261 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 TAC1P20366 129 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 ZBTB16Q05516 673 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 MGAT5Q09328 741 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 KRT39Q6A163 491 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 FAM71AQ8IYT1 594 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 DAW1Q8N136 415 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 CCDC89Q8N998 374 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 ARMC2Q8NEN0 867 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 MAIP1Q8WWC4 291 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 HERPUD2Q9BSE4 406 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 SORBS3O60504 671 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 CALRP27797 417 aaKnown RBP15.64■□□□□ 0.09
CCNF-201ENST00000293968 EPHB2P29323 1055 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 CETN2P41208 172 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
CCNF-201ENST00000293968 SPARCL1Q14515 664 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 SLC15A2Q16348 729 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 MUM1Q2TAK8 710 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 GALNTL6Q49A17 601 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 ACER1Q8TDN7 264 aa15.64■□□□□ 0.09
CCNF-201ENST00000293968 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.64■□□□□ 0.09
CCNF-201ENST00000293968 MAST2Q6P0Q8 1798 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 GOLGA8RI6L899 631 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 ZSCAN5DPP0CG00 497 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 MYCLP12524 364 aaPredicted RBP15.63■□□□□ 0.09
CCNF-201ENST00000293968 CYP1B1Q16678 543 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 ACAD10Q6JQN1 1059 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 LMNTD2Q8IXW0 634 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 ACSF2Q96CM8 615 aaPredicted RBP15.63■□□□□ 0.09
CCNF-201ENST00000293968 NAF1Q96HR8 494 aaKnown RBP15.63■□□□□ 0.09
CCNF-201ENST00000293968 NPHS2Q9NP85 383 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 UBE4BO95155 1302 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 OAS1P00973 400 aaKnown RBP15.63■□□□□ 0.09
CCNF-201ENST00000293968 CYP1A2P05177 515 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 KRT10P13645 584 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 OVGP1Q12889 678 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 PLA2G4FQ68DD2 849 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 ANKMY2Q8IV38 441 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 CD101Q93033 1021 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 KLF6Q99612 283 aaPredicted RBP15.63■□□□□ 0.09
CCNF-201ENST00000293968 KIAA1683Q9H0B3 1180 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 TCP10L2B9ZVM9 353 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 MAN1A1P33908 653 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 PPP2R5CQ13362 524 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 GNPTABQ3T906 1256 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 ZBED8Q8IZ13 594 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 MKL1Q969V6 931 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms