RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 TMPRSS15P98073 1019 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 TRIP13Q15645 432 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 FSCBQ5H9T9 825 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 MCUQ8NE86 351 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 EDEM3Q9BZQ6 932 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 ADAMTS5Q9UNA0 930 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 MYH8P13535 1937 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 COPEO14579 308 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 KRT10P13645 584 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 ARL4CP56559 192 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 VSNL1P62760 191 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 LLGL1Q15334 1064 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 SRRM1Q8IYB3 904 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 R3HDMLQ9H3Y0 253 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 ANLNQ9NQW6 1124 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 KRT39Q6A163 491 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 DNAAF3Q8N9W5 541 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 NUB1Q9Y5A7 615 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 CFLARO15519 480 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 MED7O43513 233 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 KRT38O76015 456 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 BRAFP15056 766 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 CDR2Q01850 454 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 GRAMD4Q6IC98 578 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 ARMCX2Q7L311 632 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 CALN1Q9BXU9 219 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 TRIM15Q9C019 465 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 SAYSD1Q9NPB0 183 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 BARHL2Q9NY43 387 aa12.57□□□□□ -0.4
SYNGAP1-201ENST00000293748 GOLGA8SH3BPF8 625 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 CHRNA3P32297 505 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 OCA2Q04671 838 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 GSPT2Q8IYD1 628 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 SH3TC2Q8TF17 1288 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 CYP39A1Q9NYL5 469 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 ANKFY1Q9P2R3 1169 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 APOBEC2Q9Y235 224 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 LRRC53A6NM62 1247 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 PDHA1P08559 390 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 HOXA13P31271 388 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 ARL4AP40617 200 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 AP2B1P63010 937 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 IRX1P78414 480 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 TEDDM1Q5T9Z0 273 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 SPOPLQ6IQ16 392 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 ANO5Q75V66 913 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 TTC17Q96AE7 1141 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 DYDC2Q96IM9 177 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 EPC1Q9H2F5 836 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZNF646O15015 1829 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 M0QZ92 97 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 TJP3O95049 919 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 IL1RL1Q01638 556 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 KLHL38Q2WGJ6 581 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 SPATA4Q8NEY3 305 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 RBM41Q96IZ5 413 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 MAML3Q96JK9 1138 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 KIFC3Q9BVG8 833 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 OSBPL1AQ9BXW6 950 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 LAMB1P07942 1786 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 ADGRA2Q96PE1 1338 aa12.56□□□□□ -0.4
SYNGAP1-201ENST00000293748 TTC26A0AVF1 554 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 NFIBO00712 420 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZRANB2O95218 330 aaKnown RBP eCLIP12.55□□□□□ -0.43e-6■■■■■ 27.8
SYNGAP1-201ENST00000293748 S100BP04271 92 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 NR3C2P08235 984 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 HOXC6P09630 235 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ABHD8Q96I13 439 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 WDR24Q96S15 920 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 FAM167BQ9BTA0 163 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 NDE1Q9NXR1 346 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 CCL5P13501 91 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ALDH5A1P51649 535 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 DYNLT1P63172 113 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ITKQ08881 620 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms