RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RANBP17Q9H2T7 1088 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 LRFN2Q9ULH4 789 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 UBE4BO95155 1302 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 UBN2Q6ZU65 1347 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CCDC80Q76M96 950 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 MAGEC3Q8TD91 643 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 OTUB1Q96FW1 271 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 DLGAP2Q9P1A6 1054 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CAB39Q9Y376 341 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 MYO1DO94832 1006 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CHN1P15882 459 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CIITAP33076 1130 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 FBXW4P57775 412 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 FMR1NBQ8N0W7 255 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CLEC4FQ8N1N0 589 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ERP27Q96DN0 273 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ATXN7L3BQ96GX2 97 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 RMI1Q9H9A7 625 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 LIMA1Q9UHB6 759 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 POTEMA6NI47 508 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 CCNA1P78396 465 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ROR1Q01973 937 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 GLYCTKQ8IVS8 523 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 TTC30BQ8N4P2 665 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM81AQ8TBF8 368 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 PPP1R36Q96LQ0 422 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 WNT8AQ9H1J5 351 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 GOLPH3LQ9H4A5 285 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 NPHS2Q9NP85 383 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 MOSPD1Q9UJG1 213 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 LTN1O94822 1766 aa11.32□□□□□ -0.6
PKNOX1-201ENST00000291547 USP17L3A6NCW0 530 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 USP17L4A6NCW7 530 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 NFIBO00712 420 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 RECQLP46063 649 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ROR2Q01974 943 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 KIAA1755Q5JYT7 1200 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 USP17L1Q7RTZ2 530 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 IFNEQ86WN2 208 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 NUP93Q8N1F7 819 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 GALNT4Q8N4A0 578 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 GANCQ8TET4 914 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 TMA16Q96EY4 203 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ZFATQ9P243 1243 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 HPCAL4Q9UM19 191 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 PEAK1Q9H792 1746 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 XDHP47989 1333 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 PVALEFA0A1B0GWK0 134 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 BBOX1O75936 387 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CSPG5O95196 566 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 MMP10P09238 476 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CLK1P49759 484 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 KRT17Q04695 432 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 HIF1AQ16665 826 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 SLC10A5Q5PT55 438 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 TMC4Q7Z404 712 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 RHPN2Q8IUC4 686 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF483Q8TF39 744 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 RNPC3Q96LT9 517 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CCT7Q99832 543 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 THTPAQ9BU02 230 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 UNC45AQ9H3U1 944 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 SEL1LQ9UBV2 794 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 SMG5Q9UPR3 1016 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 UBA6A0AVT1 1052 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 NEMP1O14524 444 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 MAP2K7O14733 419 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CLDN3O15551 220 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 CAMTA2O94983 1202 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 UBTFL6P0CB48 400 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ARSEP51690 589 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 MTF1Q14872 753 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF699Q32M78 642 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 MICU2Q8IYU8 434 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF507Q8TCN5 953 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 RFFLQ8WZ73 363 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 OLFML3Q9NRN5 406 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 MARCOQ9UEW3 520 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 XPO1O14980 1071 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms