RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 C2CD2Q9Y426 696 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 KIAA0355O15063 1070 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TRIM21P19474 475 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TFAMQ00059 246 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 FIGNQ5HY92 759 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TDRD10Q5VZ19 366 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 SLC24A5Q71RS6 500 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 PPFIBP1Q86W92 1011 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 LMO3Q8TAP4 145 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TAS1R2Q8TE23 839 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 IQCDQ96DY2 449 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 LSM14BQ9BX40 385 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TTYH3Q9C0H2 523 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TSPYL2Q9H2G4 693 aaPredicted RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 PLCB1Q9NQ66 1216 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 CNTN3Q9P232 1028 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TRIM43BA6NCK2 446 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 ESPNB1AK53 854 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 TIMP1P01033 207 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 NFICP08651 508 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 ITGA4P13612 1032 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 CASP14P31944 242 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 FXR1P51114 621 aaKnown RBP eCLIP20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 ADKP55263 362 aaKnown RBP20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 XKR4Q5GH76 650 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 DPY19L2P1Q6NXN4 242 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 TRIM65Q6PJ69 517 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 NEK11Q8NG66 645 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 TRIM43Q96BQ3 446 aaPredicted RBP20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 ANKRD36BP1Q96IX9 119 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 MTMR12Q9C0I1 747 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 PRDM5Q9NQX1 630 aaPredicted RBP20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 DERAQ9Y315 318 aa20.43■□□□□ 0.86
PDLIM3-202ENST00000284770 TANC1Q9C0D5 1861 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 AKR1B15C9JRZ8 316 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 RNF225M0QZC1 329 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 TMEM191BP0C7N4 346 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 RFC2P35250 354 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 BIRC3Q13489 604 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 TMEM132DQ14C87 1099 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 TRAPPC11Q7Z392 1133 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 LINC01599Q8WXQ3 324 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 TSPAN18Q96SJ8 248 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 INTS2Q9H0H0 1204 aaKnown RBP20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 CXCL16Q9H2A7 254 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 RAB20Q9NX57 234 aa20.42■□□□□ 0.86
PDLIM3-202ENST00000284770 C9IYK1 514 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 EPHB6O15197 1021 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 MFAP3LO75121 409 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 NOL4O94818 638 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 TNNC2P02585 160 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 ACTN1P12814 892 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 FAM189BP81408 668 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 KLHDC7AQ5VTJ3 777 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 ECHDC2Q86YB7 292 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 CPLX3Q8WVH0 158 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 SEMA4DQ92854 862 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 PGBD4Q96DM1 585 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 KIF12Q96FN5 646 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 ZMAT2Q96NC0 199 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 SIX2Q9NPC8 291 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 C1orf112Q9NSG2 853 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 KLK14Q9P0G3 267 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 PYCARDQ9ULZ3 195 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 GIT1Q9Y2X7 761 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 ANK1P16157 1881 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 MEIS3P2A8K0S8 358 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 PHACTR2O75167 634 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 VNN1O95497 513 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 TPM1P09493 284 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 KCNE1P15382 129 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 RAG1P15918 1043 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 ATF7P17544 494 aaPredicted RBP20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 ITGB8P26012 769 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 APBA1Q02410 837 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 AGMOQ6ZNB7 445 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 TMEM139Q8IV31 216 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 LPPQ93052 612 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 CAPN11Q9UMQ6 739 aa20.41■□□□□ 0.86
PDLIM3-202ENST00000284770 SMIM28A0A1B0GU29 152 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 A0A1W2PQJ5 194 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 ENPP3O14638 875 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 LRRN2O75325 713 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 HLA-DRAP01903 254 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 ZBTB6Q15916 424 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 COL13A1Q5TAT6 717 aaPredicted RBP20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 DEFB128Q7Z7B8 93 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 ZNF598Q86UK7 904 aaKnown RBP20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 CNGA4Q8IV77 575 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 PANX2Q96RD6 677 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 EDEM3Q9BZQ6 932 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 GANQ9H2C0 597 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 UBN1Q9NPG3 1134 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 FBXL5Q9UKA1 691 aa20.4■□□□□ 0.86
PDLIM3-202ENST00000284770 CITO14578 2027 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 EOMESO95936 686 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 SKILP12757 684 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 UCHL3P15374 230 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 PIK3CAP42336 1068 aa20.39■□□□□ 0.86
PDLIM3-202ENST00000284770 NCOA4Q13772 614 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms