RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 CCDC94Q9BW85 323 aaPredicted RBP22.6■■□□□ 1.21
YBX3-202ENST00000279550 KIAA1586Q9HCI6 787 aa22.6■■□□□ 1.21
YBX3-202ENST00000279550 RAB20Q9NX57 234 aa22.6■■□□□ 1.21
YBX3-202ENST00000279550 TAS2R14Q9NYV8 317 aa22.6■■□□□ 1.21
YBX3-202ENST00000279550 ANKFY1Q9P2R3 1169 aa22.6■■□□□ 1.21
YBX3-202ENST00000279550 MBLAC1A4D2B0 266 aaPredicted RBP22.59■■□□□ 1.21
YBX3-202ENST00000279550 TMCO5BA8MYB1 307 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 ASAP2O43150 1006 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 CCDC172P0C7W6 258 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 TNFAIP3P21580 790 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 KCNA10Q16322 511 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 CCSAPQ6IQ19 270 aaPredicted RBP22.59■■□□□ 1.21
YBX3-202ENST00000279550 FMNL3Q8IVF7 1028 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 CAGE1Q8TC20 777 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 TATDN2Q93075 761 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 VTI1AQ96AJ9 217 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 MSTO1Q9BUK6 570 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 PDE11AQ9HCR9 933 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 SMARCAL1Q9NZC9 954 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 EHD2Q9NZN4 543 aa22.59■■□□□ 1.21
YBX3-202ENST00000279550 SEC31AO94979 1220 aaKnown RBP22.58■■□□□ 1.21
YBX3-202ENST00000279550 SGPL1O95470 568 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 MYCNP04198 464 aaPredicted RBP22.58■■□□□ 1.21
YBX3-202ENST00000279550 ASGR1P07306 291 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 SRGAP2CP0DJJ0 459 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 CLDN10P78369 228 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 ADAM17P78536 824 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 MEI1Q5TIA1 1274 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 CDCA2Q69YH5 1023 aaPredicted RBP22.58■■□□□ 1.21
YBX3-202ENST00000279550 FAM71AQ8IYT1 594 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 SHC3Q92529 594 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 PI4K2AQ9BTU6 479 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 INTUQ9ULD6 942 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 AKT3Q9Y243 479 aa22.58■■□□□ 1.21
YBX3-202ENST00000279550 KIAA0391O15091 583 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 CHRNB2P17787 502 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 TCP1P17987 556 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 HOXC8P31273 242 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 USP8P40818 1118 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 PRPF4BQ13523 1007 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 TFDP1Q14186 410 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 HIC1Q14526 733 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 SEZ6Q53EL9 994 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 LHX8Q68G74 356 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 SLFN12LQ6IEE8 588 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 USP37Q86T82 979 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 RNF180Q86T96 592 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 C7orf31Q8N865 590 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 LRRC57Q8N9N7 239 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 PCSK9Q8NBP7 692 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 NLRP4Q96MN2 994 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 NT5C1BQ96P26 610 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 GOLPH3Q9H4A6 298 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 PACSIN2Q9UNF0 486 aaPredicted RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 NCANO14594 1321 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 HARSP12081 509 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 MATR3P43243 847 aaKnown RBP eCLIP22.57■■□□□ 1.2
YBX3-202ENST00000279550 EFNA5P52803 228 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 MFAP3P55082 362 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 NOP9Q86U38 636 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 TPCN2Q8NHX9 752 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 DHX38Q92620 1227 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 ZNF668Q96K58 619 aaPredicted RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 ACP6Q9NPH0 428 aa22.57■■□□□ 1.2
YBX3-202ENST00000279550 SEPT11Q9NVA2 429 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 ARGLU1Q9NWB6 273 aaPredicted RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 NOCTQ9UK39 431 aaKnown RBP22.57■■□□□ 1.2
YBX3-202ENST00000279550 CYP26A1O43174 497 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 VTNP04004 478 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 NOP2P46087 812 aaKnown RBP22.56■■□□□ 1.2
YBX3-202ENST00000279550 C2orf54Q08AI8 447 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 ZNF572Q7Z3I7 529 aaPredicted RBP22.56■■□□□ 1.2
YBX3-202ENST00000279550 ZBTB8OSQ8IWT0 167 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 RPUSD2Q8IZ73 545 aaKnown RBP22.56■■□□□ 1.2
YBX3-202ENST00000279550 KIAA0319LQ8IZA0 1049 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 PCDHB18PQ96TA0 734 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 C2orf40Q9H1Z8 148 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 RNF216Q9NWF9 866 aaPredicted RBP22.56■■□□□ 1.2
YBX3-202ENST00000279550 RBAKQ9NYW8 714 aaPredicted RBP22.56■■□□□ 1.2
YBX3-202ENST00000279550 SCN10AQ9Y5Y9 1956 aa22.56■■□□□ 1.2
YBX3-202ENST00000279550 KAT6AQ92794 2004 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 EVPLQ92817 2033 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 A0A0A6YYK5 440 aaPredicted RBP22.55■■□□□ 1.2
YBX3-202ENST00000279550 C17orf102A2RUQ5 167 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 ZRANB2O95218 330 aaKnown RBP eCLIP22.55■■□□□ 1.2
YBX3-202ENST00000279550 VNN1O95497 513 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 C4BPAP04003 597 aaKnown RBP22.55■■□□□ 1.2
YBX3-202ENST00000279550 PRKCBP05771 671 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 TMEM253P0C7T8 217 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 GNAT1P11488 350 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 DNA2P51530 1060 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 TUBB4BP68371 445 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 POU5F1BQ06416 359 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 NBPF20Q3BBV1 942 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 TDRD10Q5VZ19 366 aaKnown RBP22.55■■□□□ 1.2
YBX3-202ENST00000279550 CC2D1AQ6P1N0 951 aaPredicted RBP22.55■■□□□ 1.2
YBX3-202ENST00000279550 ZPBP2Q6X784 338 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 ARHGEF26Q96DR7 871 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 NFKBIZQ9BYH8 718 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 RAB21Q9UL25 225 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms