RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 CDR2Q01850 454 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 RPS6KA1Q15418 735 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 FAM187BQ17R55 369 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 ZBTB41Q5SVQ8 909 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 LMBRD2Q68DH5 695 aaPredicted RBP16.45■□□□□ 0.22
SF3B4-201ENST00000271628 RGMBQ6NW40 437 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 SLFN11Q7Z7L1 901 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 LINC01465Q8N7H1 131 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 LRRC57Q8N9N7 239 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 SLC35G2Q8TBE7 412 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 FAM71BQ8TC56 605 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 DHX38Q92620 1227 aaKnown RBP16.45■□□□□ 0.22
SF3B4-201ENST00000271628 TAF4BQ92750 862 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 PI4K2AQ9BTU6 479 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 PTPRHQ9HD43 1115 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
SF3B4-201ENST00000271628 TNFSF13BQ9Y275 285 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 EVPLQ92817 2033 aa16.45■□□□□ 0.22
SF3B4-201ENST00000271628 ABLIM1O14639 778 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 PHACTR2O75167 634 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 HOXC6P09630 235 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 TBXAS1P24557 533 aaPredicted RBP16.44■□□□□ 0.22
SF3B4-201ENST00000271628 CXCR5P32302 372 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 TNFAIP2Q03169 654 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 MBTD1Q05BQ5 628 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 CCDC70Q6NSX1 233 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 NOP9Q86U38 636 aaKnown RBP16.44■□□□□ 0.22
SF3B4-201ENST00000271628 SAPCD2Q86UD0 394 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 SLC47A2Q86VL8 602 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 DNAAF5Q86Y56 855 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 IMPG2Q9BZV3 1241 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 AKT3Q9Y243 479 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 VNN1O95497 513 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 FTLP02792 175 aaPredicted RBP16.44■□□□□ 0.22
SF3B4-201ENST00000271628 ZNF286BP0CG31 522 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 ABCB4P21439 1286 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 GPC5P78333 572 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 TCEAL1Q15170 157 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 SMYD5Q6GMV2 418 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 MTHFD1LQ6UB35 978 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 DAAM2Q86T65 1068 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 THAP2Q9H0W7 228 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 IFT122Q9HBG6 1241 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 VPS18Q9P253 973 aa16.44■□□□□ 0.22
SF3B4-201ENST00000271628 PDE2AO00408 941 aaPredicted RBP16.43■□□□□ 0.22
SF3B4-201ENST00000271628 ZEB2O60315 1214 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 GJB1P08034 283 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 KRT5P13647 590 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 TNFSF9P41273 254 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 HADHBP55084 474 aaKnown RBP16.43■□□□□ 0.22
SF3B4-201ENST00000271628 DUOXA2Q1HG44 320 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 ZNF568Q3ZCX4 644 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 SEZ6Q53EL9 994 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 PEX26Q7Z412 305 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 PALB2Q86YC2 1186 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 SPATA4Q8NEY3 305 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 PBKQ96KB5 322 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 PSMB7Q99436 277 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 TAS2R14Q9NYV8 317 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 PCDHB2Q9Y5E7 798 aa16.43■□□□□ 0.22
SF3B4-201ENST00000271628 RRN3P2A6NIE6 340 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 KIF4AO95239 1232 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 CHRNB2P17787 502 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 FMO1Q01740 532 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
SF3B4-201ENST00000271628 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 NCOA4Q13772 614 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 C17orf99Q6UX52 265 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 SELENOOQ9BVL4 669 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 A0A087WZ62 844 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 A6NJR5 290 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 MMEP08473 750 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 AARSP49588 968 aaKnown RBP eCLIP16.42■□□□□ 0.22
SF3B4-201ENST00000271628 CDC42EP1Q00587 391 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 CUL2Q13617 745 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 GRIK4Q16099 956 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 OR5B17Q8NGF7 314 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 RUBCNQ92622 972 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 ZBTB10Q96DT7 871 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 FDXACB1Q9BRP7 624 aaPredicted RBP16.42■□□□□ 0.22
SF3B4-201ENST00000271628 AMFRQ9UKV5 643 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 ZSWIM8A7E2V4 1837 aa16.42■□□□□ 0.22
SF3B4-201ENST00000271628 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 B4GALT4O60513 344 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 IL18RAPO95256 599 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 KYAT1Q16773 422 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 DDX1Q92499 740 aaKnown RBP16.41■□□□□ 0.22
SF3B4-201ENST00000271628 CCDC102AQ96A19 550 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 PCDHB18PQ96TA0 734 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 OSGEPQ9NPF4 335 aa16.41■□□□□ 0.22
SF3B4-201ENST00000271628 PACSIN2Q9UNF0 486 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms