RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 RPS6KA5O75582 802 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 GARSP41250 739 aaKnown RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 SKOR1P84550 965 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 DEUP1Q05D60 604 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 TMEM259Q4ZIN3 620 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 CYFIP1Q7L576 1253 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 DNAAF3Q8N9W5 541 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 PRCCQ92733 491 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 NAF1Q96HR8 494 aaKnown RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 NGRNQ9NPE2 291 aaKnown RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 AFG3L2Q9Y4W6 797 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 PIK3C2AO00443 1686 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 CCDC22O60826 627 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 IFI35P80217 286 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 MEA1Q16626 185 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 JADE1Q6IE81 842 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ATG4AQ8WYN0 398 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 FAM149B1Q96BN6 582 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 HEY1Q9Y5J3 304 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 F8VZ95 297 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 YWHABP31946 246 aaKnown RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 RCN1Q15293 331 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 EPC2Q52LR7 807 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 STRIP1Q5VSL9 837 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 OR6B2Q6IFH4 312 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 RBM41Q96IZ5 413 aaKnown RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 MKNK1Q9BUB5 465 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 ZFATQ9P243 1243 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 TRAF3IP3Q9Y228 551 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 UBR1Q8IWV7 1749 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 A6NJR5 290 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 AKAP3O75969 853 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 APOEP02649 317 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 CNGA1P29973 690 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 TFDP1Q14186 410 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 IL17AQ16552 155 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 MEI1Q5TIA1 1274 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 ZNF571Q7Z3V5 609 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 KCNK18Q7Z418 384 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 SPATA20Q8TB22 786 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 BTBD6Q96KE9 485 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 PPP1R16BQ96T49 567 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 DCCP43146 1447 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 AFF2P51816 1311 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 B2RBV5 119 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 GGPS1O95749 300 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 HSPA4LO95757 839 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 GNA15P30679 374 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 KLHL38Q2WGJ6 581 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 SNRNP48Q6IEG0 339 aaKnown RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 RHOT1Q8IXI2 618 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 TSSK1BQ9BXA7 367 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 CARD9Q9H257 536 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 KIAA1586Q9HCI6 787 aa12.22□□□□□ -0.45
VPS33A-201ENST00000267199 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.22□□□□□ -0.45
VPS33A-201ENST00000267199 ITIH2P19823 946 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 SFNP31947 248 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 ABCD1P33897 745 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 GIT2Q14161 759 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 SPOPLQ6IQ16 392 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 WDR59Q6PJI9 974 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 LVRNQ6Q4G3 990 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 PRPF31Q8WWY3 499 aaKnown RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 TTC36A6NLP5 189 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 CAPN9O14815 690 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 KLRC4O43908 158 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 MRPS9P82933 396 aaKnown RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 BTKQ06187 659 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 MED21Q13503 144 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 CYTH1Q15438 398 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 HIF1AQ16665 826 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 OLFML2BQ68BL8 750 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 C3orf20Q8ND61 904 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 MIEF2Q96C03 454 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 APOL6Q9BWW8 343 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 TMEM117Q9H0C3 514 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 VPS11Q9H270 941 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 SUDS3Q9H7L9 328 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 AGPAT3Q9NRZ7 376 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 CHRNA5P30532 468 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 PSMC6P62333 389 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 THOC5Q13769 683 aaKnown RBP12.21□□□□□ -0.45
VPS33A-201ENST00000267199 VPS72Q15906 364 aa12.21□□□□□ -0.45
VPS33A-201ENST00000267199 SLC30A10Q6XR72 485 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms